RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 MTMR4Q9NYA4 1195 aa17.85■□□□□ 0.45
MBD4-204ENST00000503197 CCDC69A6NI79 296 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 MPHOSPH10O00566 681 aaKnown RBP17.84■□□□□ 0.45
MBD4-204ENST00000503197 SCRN1Q12765 414 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 ABCB5Q2M3G0 1257 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 CCDC83Q8IWF9 413 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
MBD4-204ENST00000503197 FOXD4L1Q9NU39 408 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 NAP1L2Q9ULW6 460 aaPredicted RBP17.84■□□□□ 0.45
MBD4-204ENST00000503197 CCDC178Q5BJE1 867 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 ZNF654Q8IZM8 581 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 SLKQ9H2G2 1235 aaPredicted RBP17.84■□□□□ 0.45
MBD4-204ENST00000503197 NCOA5Q9HCD5 579 aaKnown RBP17.84■□□□□ 0.45
MBD4-204ENST00000503197 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 STX8Q9UNK0 236 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 SLC12A7Q9Y666 1083 aa17.84■□□□□ 0.45
MBD4-204ENST00000503197 GH2P01242 217 aa17.83■□□□□ 0.45
MBD4-204ENST00000503197 RXRAP19793 462 aa17.83■□□□□ 0.45
MBD4-204ENST00000503197 MICU3Q86XE3 530 aa17.83■□□□□ 0.45
MBD4-204ENST00000503197 TMEM47Q9BQJ4 181 aa17.83■□□□□ 0.45
MBD4-204ENST00000503197 FZD1Q9UP38 647 aa17.83■□□□□ 0.45
MBD4-204ENST00000503197 ZBTB43O43298 467 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 DTNBO60941 627 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 CAP2P40123 477 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 CCT2P78371 535 aaKnown RBP17.83■□□□□ 0.44
MBD4-204ENST00000503197 TROAPQ12815 778 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 SEPT2Q15019 361 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 USP48Q86UV5 1035 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 SIAH1Q8IUQ4 282 aa17.83■□□□□ 0.44
MBD4-204ENST00000503197 ATAD5Q96QE3 1844 aa17.82■□□□□ 0.44
MBD4-204ENST00000503197 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
MBD4-204ENST00000503197 NID2Q14112 1375 aa17.82■□□□□ 0.44
MBD4-204ENST00000503197 SUPT20HL1Q3ZLR7 823 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 HOOK2Q96ED9 719 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 GLIS2Q9BZE0 524 aaPredicted RBP17.81■□□□□ 0.44
MBD4-204ENST00000503197 FAM217BQ9NTX9 383 aaPredicted RBP17.81■□□□□ 0.44
MBD4-204ENST00000503197 ZBTB21Q9ULJ3 1066 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 MYH4Q9Y623 1939 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 TTLL1O95922 423 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
MBD4-204ENST00000503197 RCAN1P53805 252 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 DCAF15Q66K64 600 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 CCDC144CPQ8IYA2 1237 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 PNMA1Q8ND90 353 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 KAT14Q9H8E8 782 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.81■□□□□ 0.44
MBD4-204ENST00000503197 ZNF112Q9UJU3 913 aa17.81■□□□□ 0.44
MBD4-204ENST00000503197 CTDNEP1O95476 244 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 TOP1P11387 765 aaKnown RBP17.8■□□□□ 0.44
MBD4-204ENST00000503197 CDC27P30260 824 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 METAP2P50579 478 aaKnown RBP eCLIP17.8■□□□□ 0.44
MBD4-204ENST00000503197 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 CATIPQ7Z7H3 387 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 ZNF341Q9BYN7 854 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 CABP5Q9NP86 173 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 CLIP2Q9UDT6 1046 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 CLEC11AQ9Y240 323 aa17.8■□□□□ 0.44
MBD4-204ENST00000503197 DDAH1O94760 285 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 EEF2P13639 858 aaKnown RBP17.79■□□□□ 0.44
MBD4-204ENST00000503197 INPP5BP32019 993 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 MAP1SQ66K74 1059 aaPredicted RBP17.79■□□□□ 0.44
MBD4-204ENST00000503197 SYNE3Q6ZMZ3 975 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 CDC37L1Q7L3B6 337 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 NUP133Q8WUM0 1156 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 CDCA5Q96FF9 252 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 PAPPA2Q9BXP8 1791 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 GOLGA8AA7E2F4 631 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 ADD1P35611 737 aaKnown RBP17.79■□□□□ 0.44
MBD4-204ENST00000503197 DDIT3P35638 169 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 ICA1Q05084 483 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 RASGRP2Q7LDG7 609 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 LRRC47Q8N1G4 583 aaKnown RBP17.79■□□□□ 0.44
MBD4-204ENST00000503197 FANCBQ8NB91 859 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 KLRG1Q96E93 195 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 NYAP2Q9P242 653 aa17.79■□□□□ 0.44
MBD4-204ENST00000503197 CTNND1O60716 968 aaKnown RBP17.78■□□□□ 0.44
MBD4-204ENST00000503197 MKL1Q969V6 931 aa17.78■□□□□ 0.44
MBD4-204ENST00000503197 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
MBD4-204ENST00000503197 USP2O75604 605 aaPredicted RBP17.78■□□□□ 0.44
MBD4-204ENST00000503197 ASNSP08243 561 aa17.78■□□□□ 0.44
MBD4-204ENST00000503197 NTRK3Q16288 839 aa17.78■□□□□ 0.44
MBD4-204ENST00000503197 LDHDQ86WU2 507 aa17.78■□□□□ 0.44
MBD4-204ENST00000503197 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
MBD4-204ENST00000503197 WRNIP1Q96S55 665 aa17.78■□□□□ 0.44
MBD4-204ENST00000503197 A0A1W2PRG0 241 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 JAK2O60674 1132 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 CALM1P0DP23 149 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 CALM2P0DP24 149 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 CALM3P0DP25 149 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 ATP2B2Q01814 1243 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 PRKG1Q13976 671 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 RTN1Q16799 776 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.44
MBD4-204ENST00000503197 ZKSCAN4Q969J2 545 aaPredicted RBP17.77■□□□□ 0.44
MBD4-204ENST00000503197 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.77■□□□□ 0.44
MBD4-204ENST00000503197 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
MBD4-204ENST00000503197 CCDC84Q86UT8 332 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms