RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ERLIN2O94905 339 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 IDO1P14902 403 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 CA8P35219 290 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 NLRP6P59044 892 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 ROR2Q01974 943 aaKnown RBP7.38□□□□□ -1.23
CLCN3-203ENST00000502998 SCRN1Q12765 414 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 SNX1Q13596 522 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 DDB1Q16531 1140 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 FAM196AQ6ZSG2 479 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLCN3-203ENST00000502998 PPP1R14BQ96C90 147 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 ALS2CR12Q96Q35 445 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 SRRTQ9BXP5 876 aaKnown RBP7.38□□□□□ -1.23
CLCN3-203ENST00000502998 TBC1D2Q9BYX2 928 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 LNPKQ9C0E8 428 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 SLC7A5P2Q9GIP4 190 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 DNAAF2Q9NVR5 837 aaKnown RBP7.38□□□□□ -1.23
CLCN3-203ENST00000502998 HDAC6Q9UBN7 1215 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 CFAP45Q9UL16 551 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLCN3-203ENST00000502998 LZTS1Q9Y250 596 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 TTLL3Q9Y4R7 772 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 MRFAP1Q9Y605 127 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 PARD3Q8TEW0 1356 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 RPAP1Q9BWH6 1393 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 hCG_2014768A0A024R1R8 64 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 TMEM221A6NGB7 291 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 RIMBP2O15034 1052 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 TBC1D12O60347 775 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 DESP17661 470 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 MCM3P25205 808 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 PIK3CAP42336 1068 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 PTGER2P43116 358 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 VASPP50552 380 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 CCT8P50990 548 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 PAPOLAP51003 745 aaKnown RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 CLNS1AP54105 237 aaKnown RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 ARPC4P59998 168 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 ZBTB17Q13105 803 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 SUZ12Q15022 739 aaKnown RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 KMT5BQ4FZB7 885 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC38Q502W7 563 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 ARMC3Q5W041 872 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 NAA16Q6N069 864 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 SLC30A9Q6PML9 568 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 ATF7IPQ6VMQ6 1270 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 NEK10Q6ZWH5 1172 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 BRAPQ7Z569 592 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 SKAP1Q86WV1 359 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 IQCA1Q86XH1 822 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 RPAP2Q8IXW5 612 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 TCP11L2Q8N4U5 519 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC112Q8NEF3 446 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 OR8K1Q8NGG5 319 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 SH3TC2Q8TF17 1288 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 SLC35B4Q969S0 331 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 ERO1AQ96HE7 468 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 RPS6KC1Q96S38 1066 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 CORO1BQ9BR76 489 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 TCHPQ9BT92 498 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 UBXN6Q9BZV1 441 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 TANGO6Q9C0B7 1094 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 ALDH8A1Q9H2A2 487 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-203ENST00000502998 SPON1Q9HCB6 807 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 ZNF304Q9HCX3 659 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 MKL2Q9ULH7 1088 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 GMEB1Q9Y692 573 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 AKAP12Q02952 1782 aa7.37□□□□□ -1.23
CLCN3-203ENST00000502998 CRB1P82279 1406 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 COL18A1P39060 1754 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CASZ1Q86V15 1759 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 AATKQ6ZMQ8 1374 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 MAP3K5Q99683 1374 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 SBNO2Q9Y2G9 1366 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 SENP3-EIF4A1A0A087X0R7 540 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 GOLGA6L4A6NEF3 574 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 SPDYE3A6NKU9 549 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 SGTAO43765 313 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 LDHCP07864 332 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 FERP16591 822 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 TCF7P36402 384 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 MATR3P43243 847 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 C1QTNF8P60827 252 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CTAG1AP78358 180 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 NUCB1Q02818 461 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 PDE3BQ13370 1112 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CUL4BQ13620 913 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC57Q2TAC2 916 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 ALDH1L2Q3SY69 923 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 BOLA3Q53S33 107 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC158Q5M9N0 1113 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 RC3H1Q5TC82 1133 aaKnown RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 EMC10Q5UCC4 262 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 NUGGCQ68CJ6 796 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CPLX2Q6PUV4 134 aaKnown RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 DAAM2Q86T65 1068 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC50Q8IVM0 306 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 ARL6IP6Q8N6S5 226 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 KIAA1958Q8N8K9 716 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms