RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 PIK3C2AO00443 1686 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 PRR19A6NJB7 356 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 PHACTR2O75167 634 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 BMP3P12645 472 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 POLD1P28340 1107 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 C19orf57Q0VDD7 668 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 ALKBH2Q6NS38 261 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 MARCH10Q8NA82 808 aaPredicted RBP8.59□□□□□ -1.03
CRNDE-201ENST00000501177 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 BSNDQ8WZ55 320 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 RUSC1Q9BVN2 902 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 RNF208Q9H0X6 261 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 GTF3C3Q9Y5Q9 886 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 PPIP5K1Q6PFW1 1433 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
CRNDE-201ENST00000501177 USP6P35125 1406 aa8.58□□□□□ -1.04
CRNDE-201ENST00000501177 GRIN3BO60391 1043 aa8.58□□□□□ -1.04
CRNDE-201ENST00000501177 DLGAP3O95886 979 aa8.58□□□□□ -1.04
CRNDE-201ENST00000501177 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
CRNDE-201ENST00000501177 AAMPQ13685 434 aa8.58□□□□□ -1.04
CRNDE-201ENST00000501177 ANKRD34AQ69YU3 496 aa8.58□□□□□ -1.04
CRNDE-201ENST00000501177 SNX29Q8TEQ0 813 aa8.58□□□□□ -1.04
CRNDE-201ENST00000501177 FAM83CQ9BQN1 747 aa8.58□□□□□ -1.04
CRNDE-201ENST00000501177 METTL12A8MUP2 240 aa8.57□□□□□ -1.04
CRNDE-201ENST00000501177 EXOC5O00471 708 aa8.57□□□□□ -1.04
CRNDE-201ENST00000501177 COBLO75128 1261 aa8.57□□□□□ -1.04
CRNDE-201ENST00000501177 BEND4Q6ZU67 534 aa8.57□□□□□ -1.04
CRNDE-201ENST00000501177 PTF1AQ7RTS3 328 aa8.57□□□□□ -1.04
CRNDE-201ENST00000501177 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
CRNDE-201ENST00000501177 DBNDD2Q9BQY9 259 aa8.57□□□□□ -1.04
CRNDE-201ENST00000501177 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
CRNDE-201ENST00000501177 FAM13AO94988 1023 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 POLR3DP05423 398 aaPredicted RBP8.56□□□□□ -1.04
CRNDE-201ENST00000501177 EDN3P14138 238 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 IKBKEQ14164 716 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 MCTP1Q6DN14 999 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 GJD3Q8N144 294 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 KCNH5Q8NCM2 988 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 SHKBP1Q8TBC3 707 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 BHLHE41Q9C0J9 482 aaPredicted RBP8.56□□□□□ -1.04
CRNDE-201ENST00000501177 KCNF1Q9H3M0 494 aa8.56□□□□□ -1.04
CRNDE-201ENST00000501177 OAS3Q9Y6K5 1087 aaKnown RBP8.56□□□□□ -1.04
CRNDE-201ENST00000501177 ATP10DQ9P241 1426 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 LOC100289279A0A1B0GTE1 492 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 MEGF11A6BM72 1044 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 ABL1P00519 1130 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 HSPA6P17066 643 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 SPINK2P20155 84 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 FKBP4Q02790 459 aaKnown RBP eCLIP8.55□□□□□ -1.04
CRNDE-201ENST00000501177 SGO2Q562F6 1265 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 FDX2Q6P4F2 183 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 ASAP3Q8TDY4 903 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 TMPRSS13Q9BYE2 586 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 USP54Q70EL1 1684 aa8.55□□□□□ -1.04
CRNDE-201ENST00000501177 LY75O60449 1722 aa8.54□□□□□ -1.04
CRNDE-201ENST00000501177 FAM208AQ9UK61 1670 aaKnown RBP8.54□□□□□ -1.04
CRNDE-201ENST00000501177 ESRRAP11474 423 aaPredicted RBP8.54□□□□□ -1.04
CRNDE-201ENST00000501177 ARL4DP49703 201 aa8.54□□□□□ -1.04
CRNDE-201ENST00000501177 USP26Q9BXU7 913 aa8.54□□□□□ -1.04
CRNDE-201ENST00000501177 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
CRNDE-201ENST00000501177 NFAT5O94916 1531 aa8.54□□□□□ -1.04
CRNDE-201ENST00000501177 LTN1O94822 1766 aa8.53□□□□□ -1.04
CRNDE-201ENST00000501177 ADCY9O60503 1353 aa8.53□□□□□ -1.04
CRNDE-201ENST00000501177 TIAF1O95411 115 aa8.53□□□□□ -1.04
CRNDE-201ENST00000501177 USP5P45974 858 aa8.53□□□□□ -1.04
CRNDE-201ENST00000501177 EHHADHQ08426 723 aa8.53□□□□□ -1.04
CRNDE-201ENST00000501177 ZNF827Q17R98 1081 aa8.53□□□□□ -1.04
CRNDE-201ENST00000501177 ARHGEF25Q86VW2 580 aa8.53□□□□□ -1.04
CRNDE-201ENST00000501177 MAP4P27816 1152 aaKnown RBP8.52□□□□□ -1.05
CRNDE-201ENST00000501177 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
CRNDE-201ENST00000501177 ECM1Q16610 540 aa8.52□□□□□ -1.05
CRNDE-201ENST00000501177 SHISA5Q8N114 240 aa8.52□□□□□ -1.05
CRNDE-201ENST00000501177 MFSD14AQ96MC6 490 aa8.52□□□□□ -1.05
CRNDE-201ENST00000501177 SOX17Q9H6I2 414 aaPredicted RBP8.52□□□□□ -1.05
CRNDE-201ENST00000501177 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.05
CRNDE-201ENST00000501177 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
CRNDE-201ENST00000501177 TTC21AQ8NDW8 1320 aa8.52□□□□□ -1.05
CRNDE-201ENST00000501177 CENPJQ9HC77 1338 aaPredicted RBP8.52□□□□□ -1.05
CRNDE-201ENST00000501177 MON2Q7Z3U7 1717 aa8.51□□□□□ -1.05
CRNDE-201ENST00000501177 GAS2O43903 313 aaKnown RBP8.51□□□□□ -1.05
CRNDE-201ENST00000501177 DRD2P14416 443 aa8.51□□□□□ -1.05
CRNDE-201ENST00000501177 HMGB2P26583 209 aaKnown RBP8.51□□□□□ -1.05
CRNDE-201ENST00000501177 HOXA10P31260 410 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-201ENST00000501177 DTX1Q86Y01 620 aa8.51□□□□□ -1.05
CRNDE-201ENST00000501177 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
CRNDE-201ENST00000501177 C12orf50Q8NA57 414 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-201ENST00000501177 SMG8Q8ND04 991 aaKnown RBP8.51□□□□□ -1.05
CRNDE-201ENST00000501177 NRSN2Q9GZP1 204 aa8.51□□□□□ -1.05
CRNDE-201ENST00000501177 DOT1LQ8TEK3 1739 aa8.51□□□□□ -1.05
CRNDE-201ENST00000501177 WDR64B1ANS9 1081 aa8.5□□□□□ -1.05
CRNDE-201ENST00000501177 IL2RBP14784 551 aa8.5□□□□□ -1.05
CRNDE-201ENST00000501177 YBX3P16989 372 aaKnown RBP eCLIP8.5□□□□□ -1.05
CRNDE-201ENST00000501177 GSTM4Q03013 218 aa8.5□□□□□ -1.05
CRNDE-201ENST00000501177 LCE3BQ5TA77 95 aa8.5□□□□□ -1.05
CRNDE-201ENST00000501177 USPL1Q5W0Q7 1092 aa8.5□□□□□ -1.05
CRNDE-201ENST00000501177 NLGN2Q8NFZ4 835 aa8.5□□□□□ -1.05
CRNDE-201ENST00000501177 ACSBG1Q96GR2 724 aa8.5□□□□□ -1.05
CRNDE-201ENST00000501177 SUGCTQ9HAC7 445 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms