RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 FAM198AQ9UFP1 575 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 DDX49Q9Y6V7 483 aaKnown RBP9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 SCN9AQ15858 1988 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 PSME4Q14997 1843 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 DDX60LQ5H9U9 1706 aaKnown RBP9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 BRCA1P38398 1863 aaKnown RBP9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 FER1L6Q2WGJ9 1857 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 TTLL1O95922 423 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 RXRAP19793 462 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 RESTQ13127 1097 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 GNL2Q13823 731 aaKnown RBP9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 GRM4Q14833 912 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 SLC4A8Q2Y0W8 1093 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 RAB11FIP4Q86YS3 637 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 SLC44A5Q8NCS7 719 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 PHKBQ93100 1093 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 SYAP1Q96A49 352 aaPredicted RBP9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 TMEM47Q9BQJ4 181 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 MYL10Q9BUA6 226 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 KANSL2Q9H9L4 492 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 MYOZ2Q9NPC6 264 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 LMBRD1Q9NUN5 540 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 MTMR4Q9NYA4 1195 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 ZNF70Q9UC06 446 aaPredicted RBP9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 SYNPO2Q9UMS6 1093 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 FOCADQ5VW36 1801 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 ELP1O95163 1332 aa9.79□□□□□ -0.84
SPIRE1-211ENST00000498803 IGKV6D-41A0A0C4DH26 115 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 NMT2O60551 498 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 SHMT1P34896 483 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 UBE2HP62256 183 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 EVX2Q03828 476 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 TCP10Q12799 353 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 CERKLQ49MI3 558 aaPredicted RBP9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 TATDN1Q6P1N9 297 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 TMEM179Q6ZVK1 233 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 NBPF11Q86T75 865 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 FERMT3Q86UX7 667 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 NLGN2Q8NFZ4 835 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 HOOK2Q96ED9 719 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 CEP95Q96GE4 821 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 ZBED3Q96IU2 234 aaPredicted RBP9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 CSRNP1Q96S65 589 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 FHDC1Q9C0D6 1143 aaPredicted RBP9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 BRMS1Q9HCU9 246 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 CABP5Q9NP86 173 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 MYH1P12882 1939 aa9.78□□□□□ -0.84
SPIRE1-211ENST00000498803 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 H7C1D1 291 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 MPHOSPH10O00566 681 aaKnown RBP9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 TBC1D12O60347 775 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 PARP1P09874 1014 aaKnown RBP9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 CACNB3P54284 484 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 DNM1Q05193 864 aaKnown RBP9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 FUT2Q10981 343 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 ASPRV1Q53RT3 343 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 KRT40Q6A162 431 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 ARHGAP27Q6ZUM4 889 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 USP48Q86UV5 1035 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 FOXP1Q9H334 677 aaPredicted RBP9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 SH3GLB2Q9NR46 395 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 NYAP2Q9P242 653 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 ISY1Q9ULR0 285 aaKnown RBP9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.85
SPIRE1-211ENST00000498803 PALM3A6NDB9 673 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 DDTLA6NHG4 134 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 hCG_1984214I3L0E3 225 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 WNT10BO00744 389 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 FIBPO43427 364 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 MMP1P03956 469 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 AKR1B1P15121 316 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 U2AF2P26368 475 aaKnown RBP eCLIP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 CALML3P27482 149 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 GMPSP49915 693 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 KIF23Q02241 960 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 RASSF7Q02833 373 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 ABCB5Q2M3G0 1257 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 FOXD4L6Q3SYB3 417 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 GPATCH4Q5T3I0 446 aaKnown RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 GALNT17Q6IS24 598 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 FOXD4L3Q6VB84 417 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 ZFPM1Q8IX07 1006 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 GPC2Q8N158 579 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 ZNF713Q8N859 430 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 CCDC12Q8WUD4 166 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 MKL1Q969V6 931 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 SYT17Q9BSW7 474 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 SPZ1Q9BXG8 430 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 VEZTQ9HBM0 779 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 CNPY2Q9Y2B0 182 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 GJA3Q9Y6H8 435 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 V9GY48 417 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 ZNF646O15015 1829 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 COL4A5P29400 1685 aa9.76□□□□□ -0.85
SPIRE1-211ENST00000498803 CDK5RAP2Q96SN8 1893 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms