RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 LDHBP07195 334 aaKnown RBP14.3□□□□□ -0.12
AFF3-215ENST00000498090 U2AF2P26368 475 aaKnown RBP eCLIP14.3□□□□□ -0.12
AFF3-215ENST00000498090 GNL2Q13823 731 aaKnown RBP14.3□□□□□ -0.12
AFF3-215ENST00000498090 SART3Q15020 963 aaKnown RBP14.3□□□□□ -0.12
AFF3-215ENST00000498090 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 DACT2Q5SW24 774 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 TBC1D10CQ8IV04 446 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 CCDC144CPQ8IYA2 1237 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 IGDCC4Q8TDY8 1250 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 TBC1D22AQ8WUA7 517 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 ANKRD7Q92527 254 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 SKILP12757 684 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 PFKFB1P16118 471 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 CYP7A1P22680 504 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
AFF3-215ENST00000498090 KRT40Q6A162 431 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 NAPBQ9H115 298 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 HOOK1Q9UJC3 728 aaKnown RBP14.3□□□□□ -0.12
AFF3-215ENST00000498090 HPSEQ9Y251 543 aa14.3□□□□□ -0.12
AFF3-215ENST00000498090 CCDC196A0A1B0GTZ2 297 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 GOLGA8AA7E2F4 631 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 KIF28PB7ZC32 967 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 CUTAO60888 179 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 SYKP43405 635 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 DIXDC1Q155Q3 683 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 TMEM67Q5HYA8 995 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 STRIP1Q5VSL9 837 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 OTUD7BQ6GQQ9 843 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 NFXL1Q6ZNB6 911 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 DZIP1Q86YF9 867 aaKnown RBP14.29□□□□□ -0.12
AFF3-215ENST00000498090 NIM1KQ8IY84 436 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 ZNF710Q8N1W2 664 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 CCDC112Q8NEF3 446 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 RNF41Q9H4P4 317 aaPredicted RBP14.29□□□□□ -0.12
AFF3-215ENST00000498090 LY9Q9HBG7 655 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 TUBE1Q9UJT0 475 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 SLC12A7Q9Y666 1083 aa14.29□□□□□ -0.12
AFF3-215ENST00000498090 USP17L3A6NCW0 530 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 USP17L4A6NCW7 530 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 CCP110O43303 1012 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 CBFA2T2O43439 604 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 MBD4O95243 580 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 IFNAR1P17181 557 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
AFF3-215ENST00000498090 SAFBQ15424 915 aaKnown RBP eCLIP14.28□□□□□ -0.12
AFF3-215ENST00000498090 CEP135Q66GS9 1140 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 USP17L1Q7RTZ2 530 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 IFNL3Q8IZI9 196 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 LCORLQ8N3X6 602 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 MIGA1Q8NAN2 632 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
AFF3-215ENST00000498090 PSME4Q14997 1843 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 NEDD4P46934 1319 aa14.28□□□□□ -0.12
AFF3-215ENST00000498090 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 B4E1Z4 1266 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 RAD17O75943 681 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.12
AFF3-215ENST00000498090 FKBP1AP62942 108 aaKnown RBP14.27□□□□□ -0.12
AFF3-215ENST00000498090 PTPAQ15257 358 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 PTPN14Q15678 1187 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 NTRK3Q16288 839 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 DPCR1Q3MIW9 517 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 AKNAD1Q5T1N1 836 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 ARHGAP27Q6ZUM4 889 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 NYAP1Q6ZVC0 841 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 STAG1Q8WVM7 1258 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 RIOK1Q9BRS2 568 aaKnown RBP14.27□□□□□ -0.12
AFF3-215ENST00000498090 ZNRF3Q9ULT6 936 aa14.27□□□□□ -0.12
AFF3-215ENST00000498090 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.12
AFF3-215ENST00000498090 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.13
AFF3-215ENST00000498090 ERICH2A1L162 156 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 F8W031 263 aaPredicted RBP14.26□□□□□ -0.13
AFF3-215ENST00000498090 PSMD14O00487 310 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 IGSF3O75054 1194 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 DYNLL1P63167 89 aaKnown RBP14.26□□□□□ -0.13
AFF3-215ENST00000498090 CCZ1BP86790 482 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 CCZ1P86791 482 aaPredicted RBP14.26□□□□□ -0.13
AFF3-215ENST00000498090 RESP18Q5W5W9 173 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 MFSD6Q6ZSS7 791 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 PDCL2Q8N4E4 241 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 MAP3K14Q99558 947 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
AFF3-215ENST00000498090 ARMT1Q9H993 441 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 SUGT1Q9Y2Z0 365 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
AFF3-215ENST00000498090 PPFIA3O75145 1194 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 FILIP1Q7Z7B0 1213 aa14.26□□□□□ -0.13
AFF3-215ENST00000498090 SMAP1Q8IYB5 467 aaPredicted RBP14.26□□□□□ -0.13
AFF3-215ENST00000498090 FOXP1Q9H334 677 aaPredicted RBP14.26□□□□□ -0.13
AFF3-215ENST00000498090 GAKO14976 1311 aa14.25□□□□□ -0.13
AFF3-215ENST00000498090 CCDC88AQ3V6T2 1871 aa14.25□□□□□ -0.13
AFF3-215ENST00000498090 WDHD1O75717 1129 aaPredicted RBP14.25□□□□□ -0.13
AFF3-215ENST00000498090 VIL1P09327 827 aaKnown RBP14.25□□□□□ -0.13
AFF3-215ENST00000498090 CDC27P30260 824 aa14.25□□□□□ -0.13
AFF3-215ENST00000498090 CXCL9Q07325 125 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms