RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 KIF28PB7ZC32 967 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 DEXIO95424 95 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 CEBPZQ03701 1054 aaKnown RBP20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 CCDC178Q5BJE1 867 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 TMTC3Q6ZXV5 915 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 NEDD1Q8NHV4 660 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 KIF23Q02241 960 aaPredicted RBP20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 NLGN2Q8NFZ4 835 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 LEO1Q8WVC0 666 aaPredicted RBP20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 IDI2Q9BXS1 227 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 RNF26Q9BY78 433 aaPredicted RBP20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 TMEM63CQ9P1W3 806 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 MTMR7Q9Y216 660 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 ELP1O95163 1332 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 SLURP2P0DP57 97 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 FUT2Q10981 343 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 ANKS1AQ92625 1134 aa20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 PRMT6Q96LA8 375 aaPredicted RBP20.65■□□□□ 0.9
CHRNA4-206ENST00000498043 CNTNAP5Q8WYK1 1306 aa20.64■□□□□ 0.89
CHRNA4-206ENST00000498043 hCG_1642624A0A1W2PR95 340 aa20.64■□□□□ 0.89
CHRNA4-206ENST00000498043 ZSCAN29Q8IWY8 852 aaPredicted RBP20.64■□□□□ 0.89
CHRNA4-206ENST00000498043 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
CHRNA4-206ENST00000498043 GMLQ99445 158 aa20.64■□□□□ 0.89
CHRNA4-206ENST00000498043 TMEM47Q9BQJ4 181 aa20.64■□□□□ 0.89
CHRNA4-206ENST00000498043 PLIN4Q96Q06 1357 aa20.64■□□□□ 0.89
CHRNA4-206ENST00000498043 DDTLA6NHG4 134 aaPredicted RBP20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 AKR1B1P15121 316 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 AKAP17AQ02040 695 aaKnown RBP20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 ZSCAN23Q3MJ62 389 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 USP28Q96RU2 1077 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 SWAP70Q9UH65 585 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 CFAP45Q9UL16 551 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 SHMT1P34896 483 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 CXCL9Q07325 125 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 OGFOD1Q8N543 542 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 SRBD1Q8N5C6 995 aaKnown RBP20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 JDP2Q8WYK2 163 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 HDAC9Q9UKV0 1011 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 ARFGEF1Q9Y6D6 1849 aa20.63■□□□□ 0.89
CHRNA4-206ENST00000498043 SPDYE2BA6NHP3 402 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 SPDYE6P0CI01 402 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 KIF5BP33176 963 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 RASSF7Q02833 373 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 GNL2Q13823 731 aaKnown RBP20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 BRAPQ7Z569 592 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 RGS22Q8NE09 1264 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 ZNF396Q96N95 335 aaPredicted RBP20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 EHD4Q9H223 541 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 SH3BP5LQ7L8J4 393 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 RASGRP2Q7LDG7 609 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 CLEC10AQ8IUN9 316 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 DHX36Q9H2U1 1008 aaKnown RBP20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 KCNJ14Q9UNX9 436 aa20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 V9GY48 417 aaPredicted RBP20.62■□□□□ 0.89
CHRNA4-206ENST00000498043 GREB1LQ9C091 1923 aaPredicted RBP20.61■□□□□ 0.89
CHRNA4-206ENST00000498043 CLRN2A0PK11 232 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 PRPF3O43395 683 aaKnown RBP20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 MMP1P03956 469 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 GRM4Q14833 912 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 DLGAP5Q15398 846 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 PKN1Q16512 942 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 MYSM1Q5VVJ2 828 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 PIBF1Q8WXW3 757 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 UTRNP46939 3433 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 CIAPIN1Q6FI81 312 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 STAG2Q8N3U4 1231 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 AGBL3Q8NEM8 1001 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 TMOD2Q9NZR1 351 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 VPS54Q9P1Q0 977 aa20.6■□□□□ 0.89
CHRNA4-206ENST00000498043 ATL3Q6DD88 541 aa20.59■□□□□ 0.89
CHRNA4-206ENST00000498043 SHISA4Q96DD7 197 aa20.59■□□□□ 0.89
CHRNA4-206ENST00000498043 MAP3K14Q99558 947 aa20.59■□□□□ 0.89
CHRNA4-206ENST00000498043 PI4KBQ9UBF8 816 aa20.59■□□□□ 0.89
CHRNA4-206ENST00000498043 MAD2L2Q9UI95 211 aa20.59■□□□□ 0.89
CHRNA4-206ENST00000498043 TCP10L2B9ZVM9 353 aa20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 MPHOSPH10O00566 681 aaKnown RBP20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 TOP1P11387 765 aaKnown RBP20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 SYAP1Q96A49 352 aaPredicted RBP20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 TRIM34Q9BYJ4 488 aa20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 MTMR4Q9NYA4 1195 aa20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 BAZ2BQ9UIF8 2168 aaKnown RBP20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 ATRNL1Q5VV63 1379 aa20.58■□□□□ 0.89
CHRNA4-206ENST00000498043 GOLGA6L4A6NEF3 574 aa20.58■□□□□ 0.88
CHRNA4-206ENST00000498043 ENTPD3O75355 529 aa20.58■□□□□ 0.88
CHRNA4-206ENST00000498043 DIS3L2Q8IYB7 885 aaKnown RBP20.58■□□□□ 0.88
CHRNA4-206ENST00000498043 PGBD1Q96JS3 809 aa20.58■□□□□ 0.88
CHRNA4-206ENST00000498043 IGKV6D-41A0A0C4DH26 115 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 GOLGA6L3A6NEY3 463 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 GOLGA8HP0CJ92 632 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 U2AF2P26368 475 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 NOVP48745 357 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 LRRC47Q8N1G4 583 aaKnown RBP20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 ZNF70Q9UC06 446 aaPredicted RBP20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 CLIC4Q9Y696 253 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms