RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 GPR162Q16538 588 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 FANCBQ8NB91 859 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 TMEM39BQ9GZU3 492 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
COMMD6-212ENST00000497707 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
COMMD6-212ENST00000497707 PLIN4Q96Q06 1357 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 FUT2Q10981 343 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
COMMD6-212ENST00000497707 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 IFIT1BQ5T764 474 aaKnown RBP12.86□□□□□ -0.35
COMMD6-212ENST00000497707 NBPF11Q86T75 865 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 ZSCAN29Q8IWY8 852 aaPredicted RBP12.86□□□□□ -0.35
COMMD6-212ENST00000497707 TNPO1Q92973 898 aaKnown RBP12.86□□□□□ -0.35
COMMD6-212ENST00000497707 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 VEZTQ9HBM0 779 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 HACL1Q9UJ83 578 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 MTMR6Q9Y217 621 aa12.86□□□□□ -0.35
COMMD6-212ENST00000497707 ERICH2A1L162 156 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 PTPDC1A2A3K4 754 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 GOLGA8AA7E2F4 631 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 H7C1D1 291 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 TBC1D12O60347 775 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
COMMD6-212ENST00000497707 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
COMMD6-212ENST00000497707 RCAN1P53805 252 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 NUCB2P80303 420 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 RASA3Q14644 834 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 SLC35G1Q2M3R5 365 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 MICU3Q86XE3 530 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 ZNF287Q9HBT7 754 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 MTMR4Q9NYA4 1195 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 TMOD2Q9NZR1 351 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
COMMD6-212ENST00000497707 POTECB2RU33 542 aa12.84□□□□□ -0.35
COMMD6-212ENST00000497707 CCDC178Q5BJE1 867 aa12.84□□□□□ -0.35
COMMD6-212ENST00000497707 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
COMMD6-212ENST00000497707 CMTR1Q8N1G2 835 aaKnown RBP12.84□□□□□ -0.35
COMMD6-212ENST00000497707 CCDC17Q96LX7 622 aa12.84□□□□□ -0.35
COMMD6-212ENST00000497707 CSRNP1Q96S65 589 aa12.84□□□□□ -0.35
COMMD6-212ENST00000497707 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 STX6O43752 255 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 MYO1BO43795 1136 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 DDAH1O94760 285 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 IFNAR1P17181 557 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 RTN1Q16799 776 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 CERKLQ49MI3 558 aaPredicted RBP12.83□□□□□ -0.36
COMMD6-212ENST00000497707 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
COMMD6-212ENST00000497707 MIGA2Q7L4E1 593 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
COMMD6-212ENST00000497707 NUP133Q8WUM0 1156 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 PHKBQ93100 1093 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 AIFM3Q96NN9 605 aa12.83□□□□□ -0.36
COMMD6-212ENST00000497707 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 PLEKHA8P1O95397 391 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 GRM4Q14833 912 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 SEPT2Q15019 361 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 NBPF12Q5TAG4 269 aaPredicted RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 ANGEL2Q5VTE6 544 aaKnown RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 FOXD4L5Q5VV16 416 aaPredicted RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 DLK2Q6UY11 383 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 PNMA1Q8ND90 353 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 FOXD4L4Q8WXT5 416 aaPredicted RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 MKL1Q969V6 931 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 MAP3K14Q99558 947 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 DEFB129Q9H1M3 183 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 GJB4Q9NTQ9 266 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 ORC3Q9UBD5 711 aaPredicted RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
COMMD6-212ENST00000497707 MYH4Q9Y623 1939 aa12.82□□□□□ -0.36
COMMD6-212ENST00000497707 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
COMMD6-212ENST00000497707 GDF11O95390 407 aa12.81□□□□□ -0.36
COMMD6-212ENST00000497707 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
COMMD6-212ENST00000497707 CALM1P0DP23 149 aa12.81□□□□□ -0.36
COMMD6-212ENST00000497707 CALM2P0DP24 149 aa12.81□□□□□ -0.36
COMMD6-212ENST00000497707 CALM3P0DP25 149 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms