RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 UNC5AQ6ZN44 842 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 SLC9A7Q96T83 725 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 LNPKQ9C0E8 428 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 OSBPL2Q9H1P3 480 aa10.68□□□□□ -0.7
GARNL3-221ENST00000497703 FAM86C2PA6NEL3 165 aa10.67□□□□□ -0.7
GARNL3-221ENST00000497703 KLF4O43474 513 aa10.67□□□□□ -0.7
GARNL3-221ENST00000497703 CLEC3AO75596 197 aa10.67□□□□□ -0.7
GARNL3-221ENST00000497703 CDK5R2Q13319 367 aa10.67□□□□□ -0.7
GARNL3-221ENST00000497703 LETMD1Q6P1Q0 360 aa10.67□□□□□ -0.7
GARNL3-221ENST00000497703 TBC1D32Q96NH3 1257 aa10.66□□□□□ -0.7
GARNL3-221ENST00000497703 C7orf69Q9H7B7 122 aa10.66□□□□□ -0.7
GARNL3-221ENST00000497703 ZSWIM4Q9H7M6 989 aa10.66□□□□□ -0.7
GARNL3-221ENST00000497703 TPX2Q9ULW0 747 aaKnown RBP10.66□□□□□ -0.7
GARNL3-221ENST00000497703 DYNC1LI2O43237 492 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-221ENST00000497703 DDAH1O94760 285 aa10.65□□□□□ -0.7
GARNL3-221ENST00000497703 ACRP10323 421 aa10.65□□□□□ -0.7
GARNL3-221ENST00000497703 POLR2BP30876 1174 aaKnown RBP10.65□□□□□ -0.7
GARNL3-221ENST00000497703 CYP27A1Q02318 531 aa10.65□□□□□ -0.7
GARNL3-221ENST00000497703 PRR23CQ6ZRP0 262 aa10.65□□□□□ -0.7
GARNL3-221ENST00000497703 TOP6BLQ8N6T0 577 aa10.65□□□□□ -0.7
GARNL3-221ENST00000497703 BAHD1Q8TBE0 780 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-221ENST00000497703 TNKS2Q9H2K2 1166 aa10.65□□□□□ -0.7
GARNL3-221ENST00000497703 CEP131Q9UPN4 1083 aa10.65□□□□□ -0.7
GARNL3-221ENST00000497703 HMX2A2RU54 273 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 GSC2O15499 205 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 RNF4P78317 190 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 NCAPHQ15003 741 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 DDR2Q16832 855 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 CYP27C1Q4G0S4 372 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 SLC6A18Q96N87 628 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 C1GALT1Q9NS00 363 aa10.64□□□□□ -0.71
GARNL3-221ENST00000497703 SLC7A5Q01650 507 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 GNPTABQ3T906 1256 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 VHLLQ6RSH7 139 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 SEZ6L2Q6UXD5 910 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-221ENST00000497703 MRFAP1L1Q96HT8 127 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 COX4I2Q96KJ9 171 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 PSMG3-AS1Q96PY0 264 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 ST7Q9NRC1 585 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 TPSG1Q9NRR2 321 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 GTF2IRD1Q9UHL9 959 aa10.63□□□□□ -0.71
GARNL3-221ENST00000497703 K7ELQ4 463 aaPredicted RBP10.62□□□□□ -0.71
GARNL3-221ENST00000497703 SLITRK5O94991 958 aa10.62□□□□□ -0.71
GARNL3-221ENST00000497703 FAM87AP0C7U9 286 aa10.62□□□□□ -0.71
GARNL3-221ENST00000497703 ZYXQ15942 572 aaKnown RBP10.62□□□□□ -0.71
GARNL3-221ENST00000497703 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
GARNL3-221ENST00000497703 ZAR1Q86SH2 424 aa10.62□□□□□ -0.71
GARNL3-221ENST00000497703 MKL1Q969V6 931 aa10.62□□□□□ -0.71
GARNL3-221ENST00000497703 SRPK1Q96SB4 655 aaKnown RBP10.62□□□□□ -0.71
GARNL3-221ENST00000497703 DUSP23Q9BVJ7 150 aa10.62□□□□□ -0.71
GARNL3-221ENST00000497703 PRDM5Q9NQX1 630 aaPredicted RBP10.62□□□□□ -0.71
GARNL3-221ENST00000497703 SUCOQ9UBS9 1254 aaKnown RBP10.62□□□□□ -0.71
GARNL3-221ENST00000497703 MAPK8IP1Q9UQF2 711 aa10.62□□□□□ -0.71
GARNL3-221ENST00000497703 CCDC85CA6NKD9 419 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 UBOX5O94941 541 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 PMS1P54277 932 aaKnown RBP10.61□□□□□ -0.71
GARNL3-221ENST00000497703 BMS1Q14692 1282 aaKnown RBP10.61□□□□□ -0.71
GARNL3-221ENST00000497703 RNF43Q68DV7 783 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 OGFOD3Q6PK18 319 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 CDH24Q86UP0 819 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 FAM178BQ8IXR5 827 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 FBXL6Q8N531 539 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 MKRN2Q9H000 416 aaKnown RBP10.61□□□□□ -0.71
GARNL3-221ENST00000497703 ZNF214Q9UL59 606 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-221ENST00000497703 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
GARNL3-221ENST00000497703 NAT2P11245 290 aa10.6□□□□□ -0.71
GARNL3-221ENST00000497703 GSK3AP49840 483 aa10.6□□□□□ -0.71
GARNL3-221ENST00000497703 C6orf15Q6UXA7 325 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-221ENST00000497703 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-221ENST00000497703 H2AFB1P0C5Y9 115 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 H2AFB2P0C5Z0 115 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 NFIAQ12857 509 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 SERINC3Q13530 473 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 ARHGAP27Q6ZUM4 889 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 LRP10Q7Z4F1 713 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 NOP9Q86U38 636 aaKnown RBP10.59□□□□□ -0.71
GARNL3-221ENST00000497703 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 CELF2-AS1Q8N7Q2 184 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 DNAJB8Q8NHS0 232 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 RNF141Q8WVD5 230 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 MFSD14AQ96MC6 490 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 KREMEN1Q96MU8 473 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 DBNDD2Q9BQY9 259 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 ASPNQ9BXN1 380 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 ATG3Q9NT62 314 aa10.59□□□□□ -0.71
GARNL3-221ENST00000497703 LTBP3Q9NS15 1303 aa10.58□□□□□ -0.71
GARNL3-221ENST00000497703 MSTNO14793 375 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 IFRD2Q12894 506 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-221ENST00000497703 DOC2BQ14184 412 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 KIAA1211LQ6NV74 962 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 TMEM192Q8IY95 271 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 PPP1R13LQ8WUF5 828 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 DEPDC7Q96QD5 511 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 KCNH3Q9ULD8 1083 aa10.58□□□□□ -0.72
GARNL3-221ENST00000497703 GJB6O95452 261 aa10.57□□□□□ -0.72
GARNL3-221ENST00000497703 SFRP5Q5T4F7 317 aa10.57□□□□□ -0.72
GARNL3-221ENST00000497703 RIN3Q8TB24 985 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms