RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 USP5P45974 858 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 CACNB2Q08289 660 aaPredicted RBP16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 TTC6Q86TZ1 520 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 ITPRIPQ8IWB1 547 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 KIAA1683Q9H0B3 1180 aa16.47■□□□□ 0.23
SPTAN1-209ENST00000497216 PFASO15067 1338 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 CNMDO75829 334 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 USP14P54578 494 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 GPR153Q6NV75 609 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 CEP85Q6P2H3 762 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 FEZ1Q99689 392 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 MYH7P12883 1935 aa16.46■□□□□ 0.23
SPTAN1-209ENST00000497216 CCNA1P78396 465 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 MAP2K5Q13163 448 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 CCL14Q16627 93 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 LHX8Q68G74 356 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 CATSPERGQ6ZRH7 1159 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 LRCH3Q96II8 777 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 ANTXR1Q9H6X2 564 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 ZMYND8Q9ULU4 1186 aaPredicted RBP16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 LAMA3Q16787 3333 aa16.45■□□□□ 0.22
SPTAN1-209ENST00000497216 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
SPTAN1-209ENST00000497216 VCAM1P19320 739 aa16.44■□□□□ 0.22
SPTAN1-209ENST00000497216 SHMT1P34896 483 aa16.44■□□□□ 0.22
SPTAN1-209ENST00000497216 ABCB5Q2M3G0 1257 aa16.44■□□□□ 0.22
SPTAN1-209ENST00000497216 NDUFB9Q9Y6M9 179 aa16.44■□□□□ 0.22
SPTAN1-209ENST00000497216 BAZ2AQ9UIF9 1905 aaKnown RBP16.44■□□□□ 0.22
SPTAN1-209ENST00000497216 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 SLC15A5A6NIM6 579 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 HOXC6P09630 235 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 MAGEA10P43363 369 aaPredicted RBP16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 GABPAQ06546 454 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 AACSQ86V21 672 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 EXOC6BQ9Y2D4 811 aa16.43■□□□□ 0.22
SPTAN1-209ENST00000497216 PTPREP23469 700 aa16.42■□□□□ 0.22
SPTAN1-209ENST00000497216 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
SPTAN1-209ENST00000497216 PLCD1P51178 756 aa16.42■□□□□ 0.22
SPTAN1-209ENST00000497216 ZYXQ15942 572 aaKnown RBP16.42■□□□□ 0.22
SPTAN1-209ENST00000497216 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
SPTAN1-209ENST00000497216 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
SPTAN1-209ENST00000497216 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
SPTAN1-209ENST00000497216 COL11A1P12107 1806 aaPredicted RBP16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 LTBP2Q14767 1821 aa16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 SPDYE16A6NNV3 312 aaPredicted RBP16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 IGHA2P01877 340 aa16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 SYN1P17600 705 aa16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 GRB14Q14449 540 aa16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 MFSD14CQ5VZR4 134 aa16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 TDHQ8IZJ6 230 aa16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
SPTAN1-209ENST00000497216 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 MSCO60682 206 aa16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 PDE6AP16499 860 aa16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 RHPN1Q8TCX5 695 aa16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 CRNKL1Q9BZJ0 848 aaKnown RBP16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 FLRT1Q9NZU1 646 aa16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 IVNS1ABPQ9Y6Y0 642 aa16.4■□□□□ 0.22
SPTAN1-209ENST00000497216 POLR3DP05423 398 aaPredicted RBP16.39■□□□□ 0.21
SPTAN1-209ENST00000497216 SEPT2Q15019 361 aa16.39■□□□□ 0.21
SPTAN1-209ENST00000497216 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
SPTAN1-209ENST00000497216 COL6A3P12111 3177 aa16.38■□□□□ 0.21
SPTAN1-209ENST00000497216 PLXNA1Q9UIW2 1896 aa16.38■□□□□ 0.21
SPTAN1-209ENST00000497216 TCRBV5S4A2TA0A5A2 114 aa16.38■□□□□ 0.21
SPTAN1-209ENST00000497216 UBE2OQ9C0C9 1292 aaKnown RBP16.38■□□□□ 0.21
SPTAN1-209ENST00000497216 IL1RAPL2Q9NP60 686 aa16.38■□□□□ 0.21
SPTAN1-209ENST00000497216 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-209ENST00000497216 DDX20Q9UHI6 824 aaKnown RBP16.38■□□□□ 0.21
SPTAN1-209ENST00000497216 DNAH12Q6ZR08 3092 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 A0A1W2PRG0 241 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 STRNO43815 780 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 ATP2B2Q01814 1243 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 COG2Q14746 738 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 WDR78Q5VTH9 848 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 SLC17A8Q8NDX2 589 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 SHCBP1Q8NEM2 672 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 NPLOC4Q8TAT6 608 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 LPAR1Q92633 364 aa16.37■□□□□ 0.21
SPTAN1-209ENST00000497216 KIF1BPQ96EK5 621 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms