RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 NEDD1Q8NHV4 660 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 PHKBQ93100 1093 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 KAT14Q9H8E8 782 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 ATRNL1Q5VV63 1379 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 FAM151AQ8WW52 585 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 CEP95Q96GE4 821 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.71■□□□□ 0.75
LMNA-216ENST00000496738 FDPSP14324 419 aaKnown RBP19.7■□□□□ 0.74
LMNA-216ENST00000496738 FANCBQ8NB91 859 aa19.7■□□□□ 0.74
LMNA-216ENST00000496738 DGKHQ86XP1 1220 aa19.7■□□□□ 0.74
LMNA-216ENST00000496738 FAM43AQ8N2R8 423 aa19.7■□□□□ 0.74
LMNA-216ENST00000496738 TCP11L1Q9NUJ3 509 aa19.7■□□□□ 0.74
LMNA-216ENST00000496738 GPRC5DQ9NZD1 345 aa19.7■□□□□ 0.74
LMNA-216ENST00000496738 WDR33Q9C0J8 1336 aaKnown RBP19.69■□□□□ 0.74
LMNA-216ENST00000496738 H7C1D1 291 aa19.69■□□□□ 0.74
LMNA-216ENST00000496738 EPS15P42566 896 aa19.69■□□□□ 0.74
LMNA-216ENST00000496738 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
LMNA-216ENST00000496738 TROAPQ12815 778 aa19.69■□□□□ 0.74
LMNA-216ENST00000496738 CDC37L1Q7L3B6 337 aa19.69■□□□□ 0.74
LMNA-216ENST00000496738 TRPM4Q8TD43 1214 aa19.69■□□□□ 0.74
LMNA-216ENST00000496738 TMEM47Q9BQJ4 181 aa19.69■□□□□ 0.74
LMNA-216ENST00000496738 UBE2Q2LH0YL09 131 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 GDF11O95390 407 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 PNMA1Q8ND90 353 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
LMNA-216ENST00000496738 MTMR6Q9Y217 621 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 ZSCAN22P10073 491 aaPredicted RBP19.68■□□□□ 0.74
LMNA-216ENST00000496738 NT5C2P49902 561 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 NTRK3Q16288 839 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 RASGRP2Q7LDG7 609 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 FOXP4Q8IVH2 680 aaPredicted RBP19.68■□□□□ 0.74
LMNA-216ENST00000496738 HACL1Q9UJ83 578 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 COL2A1P02458 1487 aaPredicted RBP19.68■□□□□ 0.74
LMNA-216ENST00000496738 NID2Q14112 1375 aa19.68■□□□□ 0.74
LMNA-216ENST00000496738 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■■■■ 53.3
LMNA-216ENST00000496738 DDAH1O94760 285 aa19.67■□□□□ 0.74
LMNA-216ENST00000496738 PLEKHA8P1O95397 391 aa19.67■□□□□ 0.74
LMNA-216ENST00000496738 PDCP20941 246 aa19.67■□□□□ 0.74
LMNA-216ENST00000496738 GUCY1B3Q02153 619 aa19.67■□□□□ 0.74
LMNA-216ENST00000496738 CERKLQ49MI3 558 aaPredicted RBP19.67■□□□□ 0.74
LMNA-216ENST00000496738 CCDC178Q5BJE1 867 aa19.67■□□□□ 0.74
LMNA-216ENST00000496738 CPLX2Q6PUV4 134 aaKnown RBP19.67■□□□□ 0.74
LMNA-216ENST00000496738 SLC26A6Q9BXS9 759 aa19.67■□□□□ 0.74
LMNA-216ENST00000496738 CDKL5O76039 1030 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 RASA3Q14644 834 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 FKBP1CQ5VVH2 108 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 MIGA2Q7L4E1 593 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 FERMT3Q86UX7 667 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 AIFM3Q96NN9 605 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 GJB4Q9NTQ9 266 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 PLIN4Q96Q06 1357 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 MMP14P50281 582 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 ATP2B2Q01814 1243 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 FAM83AQ86UY5 434 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 ANKS1AQ92625 1134 aa19.66■□□□□ 0.74
LMNA-216ENST00000496738 H3BQV1 296 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 CALM1P0DP23 149 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 CALM2P0DP24 149 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 CALM3P0DP25 149 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 RRP1BQ14684 758 aaKnown RBP19.65■□□□□ 0.74
LMNA-216ENST00000496738 IFFO2Q5TF58 517 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 TATDN1Q6P1N9 297 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 LRRC47Q8N1G4 583 aaKnown RBP19.65■□□□□ 0.74
LMNA-216ENST00000496738 CTCFLQ8NI51 663 aaPredicted RBP19.65■□□□□ 0.74
LMNA-216ENST00000496738 MTMR4Q9NYA4 1195 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 IGKV6D-41A0A0C4DH26 115 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 F13A1P00488 732 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 TNNI2P48788 182 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 RCAN1P53805 252 aa19.65■□□□□ 0.74
LMNA-216ENST00000496738 ANGEL2Q5VTE6 544 aaKnown RBP19.65■□□□□ 0.74
LMNA-216ENST00000496738 CCDC196A0A1B0GTZ2 297 aa19.64■□□□□ 0.74
LMNA-216ENST00000496738 BAG4O95429 457 aaKnown RBP19.64■□□□□ 0.74
LMNA-216ENST00000496738 JAG1P78504 1218 aa19.64■□□□□ 0.74
LMNA-216ENST00000496738 CLIP2Q9UDT6 1046 aa19.64■□□□□ 0.74
LMNA-216ENST00000496738 hCG_1642624A0A1W2PR95 340 aa19.64■□□□□ 0.73
LMNA-216ENST00000496738 IFNAR1P17181 557 aa19.64■□□□□ 0.73
LMNA-216ENST00000496738 HIRAP54198 1017 aaPredicted RBP19.64■□□□□ 0.73
LMNA-216ENST00000496738 SSRP1Q08945 709 aaKnown RBP19.64■□□□□ 0.73
LMNA-216ENST00000496738 METTL16Q86W50 562 aaKnown RBP19.64■□□□□ 0.73
LMNA-216ENST00000496738 GBP4Q96PP9 640 aa19.64■□□□□ 0.73
LMNA-216ENST00000496738 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
LMNA-216ENST00000496738 RRP9O43818 475 aaKnown RBP19.63■□□□□ 0.73
LMNA-216ENST00000496738 GUCY1A2P33402 732 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 ABCB5Q2M3G0 1257 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 NBPF11Q86T75 865 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 CCDC17Q96LX7 622 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 PGAP2Q9UHJ9 254 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 SOCS7O14512 581 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 FMNL1O95466 1100 aaPredicted RBP19.63■□□□□ 0.73
LMNA-216ENST00000496738 GOLGA8HP0CJ92 632 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 TOP1P11387 765 aaKnown RBP19.63■□□□□ 0.73
LMNA-216ENST00000496738 MCM4P33991 863 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 TNFAIP1Q13829 316 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 SEPT2Q15019 361 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 STAG2Q8N3U4 1231 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 PIBF1Q8WXW3 757 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 ALG1Q9BT22 464 aa19.63■□□□□ 0.73
LMNA-216ENST00000496738 RBM28Q9NW13 759 aaKnown RBP19.63■□□□□ 0.73
LMNA-216ENST00000496738 HERC5Q9UII4 1024 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms