RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PORCNQ9H237 461 aa14.12□□□□□ -0.15
VTI1A-208ENST00000494728 DCP1AQ9NPI6 582 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-208ENST00000494728 RBPJLQ9UBG7 517 aa14.12□□□□□ -0.15
VTI1A-208ENST00000494728 CYP2D7A0A087X1C5 515 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 C19orf81C9J6K1 198 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 CNMDO75829 334 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 MBD4O95243 580 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 VCAM1P19320 739 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 UBXN2AP68543 259 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 RAB3GAP1Q15042 981 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 ABCB5Q2M3G0 1257 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 Q3C1V9 767 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 TSHZ3Q63HK5 1081 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 TMED8Q6PL24 325 aaPredicted RBP14.11□□□□□ -0.15
VTI1A-208ENST00000494728 PXYLP1Q8TE99 480 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 COA7Q96BR5 231 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 DYNLL2Q96FJ2 89 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 C12orf42Q96LP6 360 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 HAUS7Q99871 368 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 CRNKL1Q9BZJ0 848 aaKnown RBP14.11□□□□□ -0.15
VTI1A-208ENST00000494728 PAK6Q9NQU5 681 aaPredicted RBP14.11□□□□□ -0.15
VTI1A-208ENST00000494728 GINM1Q9NU53 330 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 MCM9Q9NXL9 1143 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 ZNF236Q9UL36 1845 aa14.11□□□□□ -0.15
VTI1A-208ENST00000494728 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 POLR3DP05423 398 aaPredicted RBP14.1□□□□□ -0.15
VTI1A-208ENST00000494728 SEPT2Q15019 361 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 CERKLQ49MI3 558 aaPredicted RBP14.1□□□□□ -0.15
VTI1A-208ENST00000494728 USP17L2Q6R6M4 530 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 TTC6Q86TZ1 520 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 TRIB2Q92519 343 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 DEFB118Q96PH6 123 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 PAGR1Q9BTK6 254 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 LRRCC1Q9C099 1032 aa14.1□□□□□ -0.15
VTI1A-208ENST00000494728 A0A1W2PRG0 241 aa14.09□□□□□ -0.15
VTI1A-208ENST00000494728 H0YGN5 161 aa14.09□□□□□ -0.15
VTI1A-208ENST00000494728 ERVK-9P63128 1117 aa14.09□□□□□ -0.15
VTI1A-208ENST00000494728 ERVK-24P63145 666 aa14.09□□□□□ -0.15
VTI1A-208ENST00000494728 KIAA1755Q5JYT7 1200 aa14.09□□□□□ -0.15
VTI1A-208ENST00000494728 FEZ1Q99689 392 aa14.09□□□□□ -0.15
VTI1A-208ENST00000494728 KIAA1683Q9H0B3 1180 aa14.09□□□□□ -0.15
VTI1A-208ENST00000494728 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-208ENST00000494728 ZNFX1Q9P2E3 1918 aaKnown RBP14.09□□□□□ -0.15
VTI1A-208ENST00000494728 FARP2O94887 1054 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-208ENST00000494728 SGPL1O95470 568 aa14.08□□□□□ -0.16
VTI1A-208ENST00000494728 HMGCRP04035 888 aa14.08□□□□□ -0.16
VTI1A-208ENST00000494728 HABP4Q5JVS0 413 aaKnown RBP14.08□□□□□ -0.16
VTI1A-208ENST00000494728 GPRC5AQ8NFJ5 357 aa14.08□□□□□ -0.16
VTI1A-208ENST00000494728 DIS3LQ8TF46 1054 aaKnown RBP14.08□□□□□ -0.16
VTI1A-208ENST00000494728 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.08□□□□□ -0.16
VTI1A-208ENST00000494728 PUS7LQ9H0K6 701 aaKnown RBP14.08□□□□□ -0.16
VTI1A-208ENST00000494728 AKR1B1P15121 316 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 CYP2B6P20813 491 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 CCL14Q16627 93 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 GPR142Q7Z601 462 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 SIAH1Q8IUQ4 282 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 NKX2-3Q8TAU0 364 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 USP6NLQ92738 828 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 CRISPLD2Q9H0B8 497 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 CHMP4BQ9H444 224 aaKnown RBP14.07□□□□□ -0.16
VTI1A-208ENST00000494728 BTBD7Q9P203 1132 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 PCDHB15Q9Y5E8 787 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 PLXNA1Q9UIW2 1896 aa14.07□□□□□ -0.16
VTI1A-208ENST00000494728 COL6A3P12111 3177 aa14.06□□□□□ -0.16
VTI1A-208ENST00000494728 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-208ENST00000494728 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
VTI1A-208ENST00000494728 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-208ENST00000494728 MAP3K21Q5TCX8 1036 aa14.06□□□□□ -0.16
VTI1A-208ENST00000494728 CATSPERGQ6ZRH7 1159 aa14.06□□□□□ -0.16
VTI1A-208ENST00000494728 OTUD7AQ8TE49 926 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-208ENST00000494728 RPAP3Q9H6T3 665 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-208ENST00000494728 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
VTI1A-208ENST00000494728 COLQQ9Y215 455 aaPredicted RBP14.06□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L15C9J2P7 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L13C9JLJ4 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L11C9JVI0 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L18D6R9N7 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L22D6RA61 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L17D6RBQ6 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L19D6RCP7 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L20D6RJB6 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP14P54578 494 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L24Q0WX57 530 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 UBE3CQ15386 1083 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 MORN1Q5T089 497 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 C12orf60Q5U649 245 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.16
VTI1A-208ENST00000494728 CABP5Q9NP86 173 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 PCDH10Q9P2E7 1040 aa14.05□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L12C9JPN9 530 aa14.04□□□□□ -0.16
VTI1A-208ENST00000494728 USP17L21D6R901 530 aa14.04□□□□□ -0.16
VTI1A-208ENST00000494728 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
VTI1A-208ENST00000494728 MAPK4P31152 587 aa14.04□□□□□ -0.16
VTI1A-208ENST00000494728 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
VTI1A-208ENST00000494728 LBX2Q6XYB7 198 aa14.04□□□□□ -0.16
VTI1A-208ENST00000494728 SOCS4Q8WXH5 440 aa14.04□□□□□ -0.16
VTI1A-208ENST00000494728 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
VTI1A-208ENST00000494728 PAWRQ96IZ0 340 aaKnown RBP14.04□□□□□ -0.16
VTI1A-208ENST00000494728 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms