RNA–Protein interactions for RNA: ENST00000494664.5

TIMMDC1-208, Transcript of translocase of inner mitochondrial membrane domain containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene TIMMDC1, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMMDC1-208	ENST00000494664	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	PAPPA2	Q9BXP8	1791 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	PHF20L1	A8MW92	1017 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CPA1	P15085	419 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	MCM2	P49736	904 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CBX1	P83916	185 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	RNF20	Q5VTR2	975 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	MFSD6	Q6ZSS7	791 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ZNF710	Q8N1W2	664 aa		13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	HERC5	Q9UII4	1024 aa	Known RBP	13.81	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	OTOF	Q9HC10	1997 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664		B4E1Z4	1266 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ZKSCAN1	P17029	563 aa	Predicted RBP	13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TSGA10IP	Q3SY00	556 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	FAM47A	Q5JRC9	791 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	PPP4R3B	Q5MIZ7	849 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TAF3	Q5VWG9	929 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TATDN1	Q6P1N9	297 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TOMM22	Q9NS69	142 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TBC1D12	O60347	775 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TOMM70	O94826	608 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	GDF11	O95390	407 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	PDE4B	Q07343	736 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	SUPT20HL1	Q3ZLR7	823 aa		13.8	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ORC4	O43929	436 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	KDM4A	O75164	1064 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	SLC3A2	P08195	630 aa	Known RBP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	AKR1B1	P15121	316 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	MCC	P23508	829 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	INPP5B	P32019	993 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CST9	Q5W186	159 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CHST3	Q7LGC8	479 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CLEC10A	Q8IUN9	316 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TCEANC2	Q96MN5	208 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	JAKMIP1	Q96N16	626 aa	Known RBP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	TRIM34	Q9BYJ4	488 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	MKNK2	Q9HBH9	465 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	SWAP70	Q9UH65	585 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	PASK	Q96RG2	1323 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	RANBP6	O60518	1105 aa	Known RBP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	NMT2	O60551	498 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	USP2	O75604	605 aa	Predicted RBP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CYB5R4	Q7L1T6	521 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	KLRG1	Q96E93	195 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	UPF3B	Q9BZI7	483 aa	Known RBP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	RNF41	Q9H4P4	317 aa	Predicted RBP	13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	SPTLC3	Q9NUV7	552 aa		13.79	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CELF2	O95319	508 aa	Known RBP	13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	BRD1	O95696	1058 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	SMC1B	Q8NDV3	1235 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	WRNIP1	Q96S55	665 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CAST	P20810	708 aa	Known RBP	13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ANTXR2	P58335	489 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CERKL	Q49MI3	558 aa	Predicted RBP	13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	DCAF15	Q66K64	600 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	CCDC84	Q86UT8	332 aa	Predicted RBP	13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	PDCL2	Q8N4E4	241 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	RBM46	Q8TBY0	533 aa	Known RBP	13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	IL17RA	Q96F46	866 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ZKSCAN3	Q9BRR0	538 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ZSWIM5	Q9P217	1185 aa		13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ANGEL1	Q9UNK9	670 aa	Known RBP	13.78	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	GREB1L	Q9C091	1923 aa	Predicted RBP	13.77	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ATAD5	Q96QE3	1844 aa		13.77	□□□□□ -0.2
TIMMDC1-208	ENST00000494664	ANAPC15	P60006	121 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	TFAP4	Q01664	338 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	NCOA7	Q8NI08	942 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	NEK1	Q96PY6	1258 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	ZNF341	Q9BYN7	854 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	LRRC2	Q9BYS8	371 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	ZNF112	Q9UJU3	913 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	TRPM7	Q96QT4	1865 aa		13.77	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	GH2	P01242	217 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	PC	P11498	1178 aa	Known RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	GUCY1A2	P33402	732 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	RALYL	Q86SE5	291 aa	Known RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	GPHN	Q9NQX3	736 aa	Predicted RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	IL17RB	Q9NRM6	502 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	TSPY2	A6NKD2	308 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	MPHOSPH10	O00566	681 aa	Known RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	PPP1R12B	O60237	982 aa	Predicted RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	TPM3	P06753	285 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	NF2	P35240	595 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	CAP2	P40123	477 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	TRDN	Q13061	729 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	VGLL4	Q14135	290 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	TTLL12	Q14166	644 aa	Predicted RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	ESR2	Q92731	530 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	HOOK2	Q96ED9	719 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	CLMN	Q96JQ2	1002 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	CNNM2	Q9H8M5	875 aa		13.76	□□□□□ -0.21
TIMMDC1-208	ENST00000494664	DOCK1	Q14185	1865 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms