RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 HOOK1Q9UJC3 728 aaKnown RBP18.92■□□□□ 0.62
SYP-208ENST00000494396 CLIC4Q9Y696 253 aa18.92■□□□□ 0.62
SYP-208ENST00000494396 WDR19Q8NEZ3 1342 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 HIBADHP31937 336 aaKnown RBP18.91■□□□□ 0.62
SYP-208ENST00000494396 SYKP43405 635 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 LONRF2Q1L5Z9 754 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 SRLQ86TD4 932 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 CEP112Q8N8E3 955 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 ERCC4Q92889 916 aaPredicted RBP18.91■□□□□ 0.62
SYP-208ENST00000494396 HPSEQ9Y251 543 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 KLRK1P26718 216 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 HDXQ7Z353 690 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 MB21D2Q8IYB1 491 aaPredicted RBP18.91■□□□□ 0.62
SYP-208ENST00000494396 FBXW7Q969H0 707 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 STRBPQ96SI9 672 aaKnown RBP18.91■□□□□ 0.62
SYP-208ENST00000494396 MKRN1Q9UHC7 482 aaKnown RBP18.91■□□□□ 0.62
SYP-208ENST00000494396 LEMD3Q9Y2U8 911 aa18.91■□□□□ 0.62
SYP-208ENST00000494396 XDHP47989 1333 aa18.9■□□□□ 0.62
SYP-208ENST00000494396 KLRG2A4D1S0 409 aaPredicted RBP18.9■□□□□ 0.62
SYP-208ENST00000494396 FANCGO15287 622 aa18.9■□□□□ 0.62
SYP-208ENST00000494396 HOXA10P31260 410 aaPredicted RBP18.9■□□□□ 0.62
SYP-208ENST00000494396 GNL2Q13823 731 aaKnown RBP18.9■□□□□ 0.62
SYP-208ENST00000494396 NCOA7Q8NI08 942 aa18.9■□□□□ 0.62
SYP-208ENST00000494396 KIFC2Q96AC6 838 aa18.9■□□□□ 0.62
SYP-208ENST00000494396 GBP3Q9H0R5 595 aa18.9■□□□□ 0.62
SYP-208ENST00000494396 DACH1Q9UI36 760 aa18.9■□□□□ 0.62
SYP-208ENST00000494396 RAB21Q9UL25 225 aa18.9■□□□□ 0.62
SYP-208ENST00000494396 PDS5AQ29RF7 1337 aaKnown RBP18.9■□□□□ 0.62
SYP-208ENST00000494396 ATP1A3P13637 1013 aa18.89■□□□□ 0.62
SYP-208ENST00000494396 NAA15Q9BXJ9 866 aaKnown RBP18.89■□□□□ 0.62
SYP-208ENST00000494396 ABCF2Q9UG63 623 aa18.89■□□□□ 0.62
SYP-208ENST00000494396 COL1A1P02452 1464 aaPredicted RBP18.89■□□□□ 0.61
SYP-208ENST00000494396 BIN1O00499 593 aa18.89■□□□□ 0.61
SYP-208ENST00000494396 BBOX1O75936 387 aa18.89■□□□□ 0.61
SYP-208ENST00000494396 APPP05067 770 aa18.89■□□□□ 0.61
SYP-208ENST00000494396 SRGAP1Q7Z6B7 1085 aa18.89■□□□□ 0.61
SYP-208ENST00000494396 RALYLQ86SE5 291 aaKnown RBP18.89■□□□□ 0.61
SYP-208ENST00000494396 NBPF3Q9H094 633 aa18.89■□□□□ 0.61
SYP-208ENST00000494396 ACBD3Q9H3P7 528 aa18.89■□□□□ 0.61
SYP-208ENST00000494396 NCOA5Q9HCD5 579 aaKnown RBP18.89■□□□□ 0.61
SYP-208ENST00000494396 PNPLA7Q6ZV29 1317 aa18.89■□□□□ 0.61
SYP-208ENST00000494396 PRC1O43663 620 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 SPECC1LQ69YQ0 1117 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 MSANTD4Q8NCY6 345 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 CRAMP1Q96RY5 1269 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 BRIP1Q9BX63 1249 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 RAI14Q9P0K7 980 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 ZMYM6O95789 1325 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.88■□□□□ 0.61
SYP-208ENST00000494396 MBD4O95243 580 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 FOSBP53539 338 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 GUCY1B3Q02153 619 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 ALX1Q15699 326 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
SYP-208ENST00000494396 RSPH14Q9UHP6 348 aa18.88■□□□□ 0.61
SYP-208ENST00000494396 RRP15Q9Y3B9 282 aaKnown RBP18.88■□□□□ 0.61
SYP-208ENST00000494396 CHD4Q14839 1912 aa18.87■□□□□ 0.61
SYP-208ENST00000494396 LMAN1P49257 510 aa18.87■□□□□ 0.61
SYP-208ENST00000494396 ANTXR2P58335 489 aa18.87■□□□□ 0.61
SYP-208ENST00000494396 KIF23Q02241 960 aaPredicted RBP18.87■□□□□ 0.61
SYP-208ENST00000494396 WDR24Q96S15 920 aa18.87■□□□□ 0.61
SYP-208ENST00000494396 GPHNQ9NQX3 736 aaPredicted RBP18.87■□□□□ 0.61
SYP-208ENST00000494396 IRS2Q9Y4H2 1338 aa18.87■□□□□ 0.61
SYP-208ENST00000494396 CCDC175P0C221 793 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 GNAT2P19087 354 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 TBC1D10CQ8IV04 446 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 CCDC34Q96HJ3 373 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 PANX2Q96RD6 677 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 ZCCHC17Q9NP64 241 aaKnown RBP18.86■□□□□ 0.61
SYP-208ENST00000494396 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.86■□□□□ 0.61
SYP-208ENST00000494396 PATL2C9JE40 543 aaKnown RBP18.86■□□□□ 0.61
SYP-208ENST00000494396 MMP10P09238 476 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 CYP7A1P22680 504 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 TXNRD3Q86VQ6 643 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 DPF2Q92785 391 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 ARMT1Q9H993 441 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 BRMS1Q9HCU9 246 aa18.86■□□□□ 0.61
SYP-208ENST00000494396 CUTAO60888 179 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 POLR3DP05423 398 aaPredicted RBP18.85■□□□□ 0.61
SYP-208ENST00000494396 TRDNQ13061 729 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 TMC4Q7Z404 712 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 TC2NQ8N9U0 490 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 TRIML1Q8N9V2 468 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 MLKLQ8NB16 471 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 CAMKK2Q96RR4 588 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 CPLX1O14810 134 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 CDKL5O76039 1030 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 MAGEA9P43362 315 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 NOP2P46087 812 aaKnown RBP18.85■□□□□ 0.61
SYP-208ENST00000494396 GPSM2P81274 684 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 BEND6Q5SZJ8 279 aaPredicted RBP18.85■□□□□ 0.61
SYP-208ENST00000494396 RESP18Q5W5W9 173 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 C15orf52Q6ZUT6 534 aaKnown RBP18.85■□□□□ 0.61
SYP-208ENST00000494396 IFNL3Q8IZI9 196 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 TRERF1Q96PN7 1200 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 MED4Q9NPJ6 270 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 CDC23Q9UJX2 597 aa18.85■□□□□ 0.61
SYP-208ENST00000494396 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms