RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 CNBD1Q8NA66 436 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 HSD3B7Q9H2F3 369 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 FANCLQ9NW38 375 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 FUT2Q10981 343 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 NCAPHQ15003 741 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 SERTAD1Q9UHV2 236 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 ZNF215Q9UL58 517 aaPredicted RBP14.24□□□□□ -0.13
PHF3-205ENST00000494284 KCNH3Q9ULD8 1083 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 GTF2F1P35269 517 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■■■□□ 17.2
PHF3-205ENST00000494284 NLRP12P59046 1061 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 FANCCQ00597 558 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 CREBRFQ8IUR6 639 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 TIAM2Q8IVF5 1701 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 MYH6P13533 1939 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 TSPY2A6NKD2 308 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 RIMBP2O15034 1052 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 CAVIN2O95810 425 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 KLHL10Q6JEL2 608 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 LRRN4CLQ8ND94 238 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 RNF41Q9H4P4 317 aaPredicted RBP14.23□□□□□ -0.13
PHF3-205ENST00000494284 IL17RBQ9NRM6 502 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 HPSEQ9Y251 543 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 DUOX1Q9NRD9 1551 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 NHSQ6T4R5 1651 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 DEXIO95424 95 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 SFPQP23246 707 aaKnown RBP eCLIP14.23□□□□□ -0.13
PHF3-205ENST00000494284 AFMP43652 599 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 CLEC10AQ8IUN9 316 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 SMYD4Q8IYR2 804 aaPredicted RBP14.23□□□□□ -0.13
PHF3-205ENST00000494284 MAP7D2Q96T17 732 aa14.23□□□□□ -0.13
PHF3-205ENST00000494284 CCDC94Q9BW85 323 aaPredicted RBP14.23□□□□□ -0.13
PHF3-205ENST00000494284 FBXO2Q9UK22 296 aaPredicted RBP14.23□□□□□ -0.13
PHF3-205ENST00000494284 UBASH3AP57075 661 aa14.22□□□□□ -0.13
PHF3-205ENST00000494284 RCSD1Q6JBY9 416 aa14.22□□□□□ -0.13
PHF3-205ENST00000494284 SYT10Q6XYQ8 523 aa14.22□□□□□ -0.13
PHF3-205ENST00000494284 CCAR2Q8N163 923 aaKnown RBP14.22□□□□□ -0.13
PHF3-205ENST00000494284 USP5P45974 858 aa14.22□□□□□ -0.13
PHF3-205ENST00000494284 TFAP4Q01664 338 aa14.22□□□□□ -0.13
PHF3-205ENST00000494284 E4F1Q66K89 784 aaPredicted RBP14.22□□□□□ -0.13
PHF3-205ENST00000494284 HOMER1Q86YM7 354 aa14.22□□□□□ -0.13
PHF3-205ENST00000494284 IRS2Q9Y4H2 1338 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 UFL1O94874 794 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 NPY5RQ15761 445 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 SLC35G1Q2M3R5 365 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 RC3H1Q5TC82 1133 aaKnown RBP14.21□□□□□ -0.13
PHF3-205ENST00000494284 CATIPQ7Z7H3 387 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 KRI1Q8N9T8 703 aaKnown RBP14.21□□□□□ -0.13
PHF3-205ENST00000494284 SMTNL1A8MU46 457 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 GYS1P13807 737 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 STX17P56962 302 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 SAFBQ15424 915 aaKnown RBP eCLIP14.21□□□□□ -0.13
PHF3-205ENST00000494284 TYW1BQ6NUM6 668 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 CERKQ8TCT0 537 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 DHX58Q96C10 678 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 ANAPC4Q9UJX5 808 aa14.21□□□□□ -0.13
PHF3-205ENST00000494284 CDC25BP30305 580 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 AKAP17AQ02040 695 aaKnown RBP14.2□□□□□ -0.14
PHF3-205ENST00000494284 FMR1Q06787 632 aaKnown RBP eCLIP14.2□□□□□ -0.143e-11■■□□□ 12.1
PHF3-205ENST00000494284 KRBA2Q6ZNG9 492 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 PIK3AP1Q6ZUJ8 805 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 CRNKL1Q9BZJ0 848 aaKnown RBP14.2□□□□□ -0.14
PHF3-205ENST00000494284 ZHX1Q9UKY1 873 aaPredicted RBP14.2□□□□□ -0.14
PHF3-205ENST00000494284 STX8Q9UNK0 236 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
PHF3-205ENST00000494284 PCNTO95613 3336 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 LDHBP07195 334 aaKnown RBP14.2□□□□□ -0.14
PHF3-205ENST00000494284 DDR1Q08345 913 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 POLLQ9UGP5 575 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 PPP6R2O75170 966 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
PHF3-205ENST00000494284 ELF2Q15723 593 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 MED15Q96RN5 788 aa14.2□□□□□ -0.14
PHF3-205ENST00000494284 CNTNAP5Q8WYK1 1306 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 STK36Q9NRP7 1315 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 VWA3AA6NCI4 1184 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 ADKP55263 362 aaKnown RBP14.19□□□□□ -0.14
PHF3-205ENST00000494284 EIF6P56537 245 aaKnown RBP14.19□□□□□ -0.14
PHF3-205ENST00000494284 GRAPQ13588 217 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 JMYQ8N9B5 988 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 GRAPLQ8TC17 118 aaPredicted RBP14.19□□□□□ -0.14
PHF3-205ENST00000494284 RPGRQ92834 1020 aaKnown RBP14.19□□□□□ -0.14
PHF3-205ENST00000494284 PLIN2Q99541 437 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
PHF3-205ENST00000494284 SBF2Q86WG5 1849 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 FAM205AQ6ZU69 1335 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 SERPINB2P05120 415 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 MCM7P33993 719 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 TPM4P67936 248 aa14.19□□□□□ -0.14
PHF3-205ENST00000494284 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
PHF3-205ENST00000494284 RBM6P78332 1123 aaKnown RBP14.18□□□□□ -0.14
PHF3-205ENST00000494284 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
PHF3-205ENST00000494284 TMTC3Q6ZXV5 915 aa14.18□□□□□ -0.14
PHF3-205ENST00000494284 CPLX3Q8WVH0 158 aa14.18□□□□□ -0.14
PHF3-205ENST00000494284 PPP1R13BQ96KQ4 1090 aa14.18□□□□□ -0.14
PHF3-205ENST00000494284 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms