RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 BTBD19C9JJ37 291 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 TSPY3P0CV98 308 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 TSPY8P0CW00 308 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 PCP11498 1178 aaKnown RBP14.78□□□□□ -0.04
TRA2A-209ENST00000494255 HMGCS2P54868 508 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 AKNAD1Q5T1N1 836 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 MFSD6Q6ZSS7 791 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 ANKRD23Q86SG2 305 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 PROCA1Q8NCQ7 364 aaPredicted RBP14.78□□□□□ -0.04
TRA2A-209ENST00000494255 PTPN18Q99952 460 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 SH2D4AQ9H788 454 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 KANSL2Q9H9L4 492 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
TRA2A-209ENST00000494255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRA2A-209ENST00000494255 TSPY2A6NKD2 308 aa14.77□□□□□ -0.04
TRA2A-209ENST00000494255 ORC4O43929 436 aa14.77□□□□□ -0.04
TRA2A-209ENST00000494255 USP14P54578 494 aa14.77□□□□□ -0.04
TRA2A-209ENST00000494255 SH3D19Q5HYK7 790 aa14.77□□□□□ -0.04
TRA2A-209ENST00000494255 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.04
TRA2A-209ENST00000494255 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.04
TRA2A-209ENST00000494255 STAG1Q8WVM7 1258 aa14.77□□□□□ -0.04
TRA2A-209ENST00000494255 ZCCHC17Q9NP64 241 aaKnown RBP14.77□□□□□ -0.04
TRA2A-209ENST00000494255 FOXN1O15353 648 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 RANBP6O60518 1105 aaKnown RBP14.77□□□□□ -0.05
TRA2A-209ENST00000494255 FGRP09769 529 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 CTCFP49711 727 aaPredicted RBP14.77□□□□□ -0.05
TRA2A-209ENST00000494255 TFAP4Q01664 338 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 ATP2B2Q01814 1243 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 TAF1CQ15572 869 aaPredicted RBP14.77□□□□□ -0.05
TRA2A-209ENST00000494255 FAM47AQ5JRC9 791 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 ACER1Q8TDN7 264 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 MAP4K1Q92918 833 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 LSG1Q9H089 658 aaKnown RBP14.77□□□□□ -0.05
TRA2A-209ENST00000494255 KIAA1683Q9H0B3 1180 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 INCENPQ9NQS7 918 aa14.77□□□□□ -0.05
TRA2A-209ENST00000494255 LOC285556D6RIA3 1793 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 GREB1LQ9C091 1923 aaPredicted RBP14.76□□□□□ -0.05
TRA2A-209ENST00000494255 PDHXO00330 501 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 PABPC4Q13310 644 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRA2A-209ENST00000494255 MOGSQ13724 837 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 ZYXQ15942 572 aaKnown RBP14.76□□□□□ -0.05
TRA2A-209ENST00000494255 PPP4R3BQ5MIZ7 849 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 TBC1D10CQ8IV04 446 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 FAM43AQ8N2R8 423 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 NEDD1Q8NHV4 660 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 NBPF3Q9H094 633 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 AGTPBP1Q9UPW5 1226 aa14.76□□□□□ -0.05
TRA2A-209ENST00000494255 RBM8AQ9Y5S9 174 aaKnown RBP14.76□□□□□ -0.05
TRA2A-209ENST00000494255 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 EEF2P13639 858 aaKnown RBP14.75□□□□□ -0.05
TRA2A-209ENST00000494255 NT5C2P49902 561 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 GPAT2Q6NUI2 795 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 CLEC10AQ8IUN9 316 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 PLIN4Q96Q06 1357 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 ZFYVE28Q9HCC9 887 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 NYAP2Q9P242 653 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 TSKSQ9UJT2 592 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 SLC45A1Q9Y2W3 748 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 TACC3Q9Y6A5 838 aa14.75□□□□□ -0.05
TRA2A-209ENST00000494255 ESR2Q92731 530 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 C12orf42Q96LP6 360 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 PARK7Q99497 189 aaKnown RBP14.74□□□□□ -0.05
TRA2A-209ENST00000494255 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.74□□□□□ -0.05
TRA2A-209ENST00000494255 CFHR5Q9BXR6 569 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 CNNM2Q9H8M5 875 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 PNMA3Q9UL41 463 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 NEDD4P46934 1319 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 IGKV6D-41A0A0C4DH26 115 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 A0A1W2PRG0 241 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 REC8O95072 547 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 TTLL1O95922 423 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 HSPA8P11142 646 aaKnown RBP14.74□□□□□ -0.05
TRA2A-209ENST00000494255 TRDNQ13061 729 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 DGKZQ13574 1117 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 CEP95Q96GE4 821 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 KRT23Q9C075 422 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 GOPCQ9HD26 462 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 EMILIN3Q9NT22 766 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 MTMR4Q9NYA4 1195 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 TMX2Q9Y320 296 aa14.74□□□□□ -0.05
TRA2A-209ENST00000494255 CYP21A2P08686 494 aa14.73□□□□□ -0.05
TRA2A-209ENST00000494255 OSBPP22059 807 aa14.73□□□□□ -0.05
TRA2A-209ENST00000494255 CRHR2Q13324 411 aa14.73□□□□□ -0.05
TRA2A-209ENST00000494255 SIAH1Q8IUQ4 282 aa14.73□□□□□ -0.05
TRA2A-209ENST00000494255 CLIP2Q9UDT6 1046 aa14.73□□□□□ -0.05
TRA2A-209ENST00000494255 MYH4Q9Y623 1939 aa14.73□□□□□ -0.05
TRA2A-209ENST00000494255 RAD21O60216 631 aa14.72□□□□□ -0.05
TRA2A-209ENST00000494255 LBX1P52954 281 aa14.72□□□□□ -0.05
TRA2A-209ENST00000494255 IRX3P78415 501 aaPredicted RBP14.72□□□□□ -0.05
TRA2A-209ENST00000494255 RNF20Q5VTR2 975 aa14.72□□□□□ -0.05
TRA2A-209ENST00000494255 LPAR1Q92633 364 aa14.72□□□□□ -0.05
TRA2A-209ENST00000494255 VCPKMTQ9H867 229 aa14.72□□□□□ -0.05
TRA2A-209ENST00000494255 B4E1Z4 1266 aa14.71□□□□□ -0.05
TRA2A-209ENST00000494255 KDM4AO75164 1064 aa14.71□□□□□ -0.05
TRA2A-209ENST00000494255 VCAM1P19320 739 aa14.71□□□□□ -0.05
TRA2A-209ENST00000494255 RALYLQ86SE5 291 aaKnown RBP14.71□□□□□ -0.05
TRA2A-209ENST00000494255 IQCA1Q86XH1 822 aa14.71□□□□□ -0.05
TRA2A-209ENST00000494255 SMCR8Q8TEV9 937 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms