RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 PARP3Q9Y6F1 533 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 RTL9Q8NET4 1388 aa12.5□□□□□ -0.41
COL2A1-208ENST00000493991 PARP1P09874 1014 aaKnown RBP12.49□□□□□ -0.41
COL2A1-208ENST00000493991 SLC16A2P36021 539 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 POSTNQ15063 836 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 USH1GQ495M9 461 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 CLEC17AQ6ZS10 378 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 C10orf67Q8IYJ2 551 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 DESI2Q9BSY9 194 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 SRRTQ9BXP5 876 aaKnown RBP12.49□□□□□ -0.41
COL2A1-208ENST00000493991 RTEL1Q9NZ71 1219 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 CTNND2Q9UQB3 1225 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 TCERG1LQ5VWI1 586 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 IPO4Q8TEX9 1081 aaKnown RBP12.49□□□□□ -0.41
COL2A1-208ENST00000493991 RABEP2Q9H5N1 569 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 FER1L4A9Z1Z3 1794 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 SLC39A14Q15043 492 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 SPICE1Q8N0Z3 855 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 MXD3Q9BW11 206 aa12.49□□□□□ -0.41
COL2A1-208ENST00000493991 SCAF8Q9UPN6 1271 aaKnown RBP12.49□□□□□ -0.41
COL2A1-208ENST00000493991 RGPD8O14715 1765 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 KLRF2D3W0D1 207 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 SH3RF3Q8TEJ3 882 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 BMP2KQ9NSY1 1161 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 USP40Q9NVE5 1235 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 ZNHIT6Q9NWK9 470 aaKnown RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 WDHD1O75717 1129 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 CALM1P0DP23 149 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 CALM2P0DP24 149 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 CALM3P0DP25 149 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 AXDND1Q5T1B0 1012 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 SLF2Q8IX21 1173 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 RBM17Q96I25 401 aaKnown RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 CUTAO60888 179 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 KIF20AO95235 890 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 EVX2Q03828 476 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 CCDC144BQ3MJ40 725 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 ENAHQ8N8S7 591 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 NEK11Q8NG66 645 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 CCDC12Q8WUD4 166 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 RRP36Q96EU6 259 aaKnown RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 SEPT11Q9NVA2 429 aaKnown RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 BSDC1Q9NW68 430 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 TAB2Q9NYJ8 693 aa12.48□□□□□ -0.41
COL2A1-208ENST00000493991 PUF60Q9UHX1 559 aaKnown RBP12.48□□□□□ -0.41
COL2A1-208ENST00000493991 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 USP27XA6NNY8 438 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 CAVIN2O95810 425 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 CMA1P23946 247 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 GSDMDP57764 484 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 SLC51AQ86UW1 340 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 IQUBQ8NA54 791 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 PRDM4Q9UKN5 801 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 NRXN3Q9Y4C0 1643 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 TRIM21P19474 475 aaKnown RBP12.47□□□□□ -0.41
COL2A1-208ENST00000493991 SNAP25P60880 206 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 GRIN1Q05586 938 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 ADGRA1Q86SQ6 560 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
COL2A1-208ENST00000493991 CARD6Q9BX69 1037 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 POLD4Q9HCU8 107 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL2A1-208ENST00000493991 NLRP12P59046 1061 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 SP4Q02446 784 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 PLS1Q14651 629 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 BMS1Q14692 1282 aaKnown RBP12.47□□□□□ -0.41
COL2A1-208ENST00000493991 TDRD12Q587J7 1177 aaKnown RBP12.47□□□□□ -0.41
COL2A1-208ENST00000493991 FKBP15Q5T1M5 1219 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 LRP10Q7Z4F1 713 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 ZNF397Q8NF99 534 aaPredicted RBP12.47□□□□□ -0.41
COL2A1-208ENST00000493991 CALML4Q96GE6 196 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
COL2A1-208ENST00000493991 NTSR2O95665 410 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 CHMP4BP1P59074 171 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 PRKG1Q13976 671 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 LEKR1Q6ZMV7 388 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 SMARCC2Q8TAQ2 1214 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 COA7Q96BR5 231 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 EPC1Q9H2F5 836 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 ZBTB21Q9ULJ3 1066 aa12.46□□□□□ -0.41
COL2A1-208ENST00000493991 TCHHQ07283 1943 aa12.46□□□□□ -0.42
COL2A1-208ENST00000493991 AFF2P51816 1311 aa12.46□□□□□ -0.42
COL2A1-208ENST00000493991 IFNAR1P17181 557 aa12.46□□□□□ -0.42
COL2A1-208ENST00000493991 TECP42680 631 aa12.46□□□□□ -0.42
COL2A1-208ENST00000493991 NCBP1Q09161 790 aaKnown RBP12.46□□□□□ -0.42
COL2A1-208ENST00000493991 KRBA2Q6ZNG9 492 aa12.46□□□□□ -0.42
COL2A1-208ENST00000493991 DCP1AQ9NPI6 582 aaPredicted RBP12.46□□□□□ -0.42
COL2A1-208ENST00000493991 EXOC1Q9NV70 894 aa12.46□□□□□ -0.42
COL2A1-208ENST00000493991 NARFQ9UHQ1 456 aa12.46□□□□□ -0.42
COL2A1-208ENST00000493991 CLRN2A0PK11 232 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 SMCO2A6NFE2 343 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms