RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IQCB1Q15051 598 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 DIXDC1Q155Q3 683 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 PLA2G4DQ86XP0 818 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 CACTINQ8WUQ7 758 aaKnown RBP15.84■□□□□ 0.13
VCP-207ENST00000493886 CD209Q9NNX6 404 aa15.84■□□□□ 0.13
VCP-207ENST00000493886 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
VCP-207ENST00000493886 TPM3P06753 285 aa15.83■□□□□ 0.12
VCP-207ENST00000493886 USP5P45974 858 aa15.83■□□□□ 0.12
VCP-207ENST00000493886 FUT2Q10981 343 aa15.83■□□□□ 0.12
VCP-207ENST00000493886 TXNRD1Q16881 649 aa15.83■□□□□ 0.12
VCP-207ENST00000493886 SH3RF3Q8TEJ3 882 aaPredicted RBP15.83■□□□□ 0.12
VCP-207ENST00000493886 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.83■□□□□ 0.12
VCP-207ENST00000493886 NMT2O60551 498 aa15.83■□□□□ 0.12
VCP-207ENST00000493886 ZSCAN20P17040 1043 aaPredicted RBP15.83■□□□□ 0.12
VCP-207ENST00000493886 HOXA10P31260 410 aaPredicted RBP15.83■□□□□ 0.12
VCP-207ENST00000493886 PROM2Q8N271 834 aa15.83■□□□□ 0.12
VCP-207ENST00000493886 ZNF592Q92610 1267 aa15.83■□□□□ 0.12
VCP-207ENST00000493886 PLEKHA8P1O95397 391 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 BAG3O95817 575 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 CBX1P83916 185 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 SLC4A8Q2Y0W8 1093 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 MTERF4Q7Z6M4 381 aaKnown RBP15.82■□□□□ 0.12
VCP-207ENST00000493886 FILIP1Q7Z7B0 1213 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 KIAA1468Q9P260 1216 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 EP400Q96L91 3159 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 TSPY2A6NKD2 308 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 PRPF3O43395 683 aaKnown RBP15.82■□□□□ 0.12
VCP-207ENST00000493886 LDHCP07864 332 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 TOB1P50616 345 aaPredicted RBP15.82■□□□□ 0.12
VCP-207ENST00000493886 PPP4CP60510 307 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 NR5A1Q13285 461 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 PKN1Q16512 942 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 C12orf60Q5U649 245 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 SHC4Q6S5L8 630 aa15.82■□□□□ 0.12
VCP-207ENST00000493886 NOL10Q9BSC4 688 aaKnown RBP15.82■□□□□ 0.12
VCP-207ENST00000493886 BECN2A8MW95 431 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 IL1R1P14778 569 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 XBP1P17861 261 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
VCP-207ENST00000493886 CRAMP1Q96RY5 1269 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 HPSEQ9Y251 543 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 CUTAO60888 179 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 SYKP43405 635 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 RILPL1Q5EBL4 403 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 TMTC3Q6ZXV5 915 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 OXER1Q8TDS5 423 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 CLIC6Q96NY7 704 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 V9GY48 417 aaPredicted RBP15.81■□□□□ 0.12
VCP-207ENST00000493886 KLRG2A4D1S0 409 aaPredicted RBP15.81■□□□□ 0.12
VCP-207ENST00000493886 NAA30Q147X3 362 aaPredicted RBP15.81■□□□□ 0.12
VCP-207ENST00000493886 CEP57L1Q8IYX8 460 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 SHISA4Q96DD7 197 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 CCDC94Q9BW85 323 aaPredicted RBP15.81■□□□□ 0.12
VCP-207ENST00000493886 VPS54Q9P1Q0 977 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 POLLQ9UGP5 575 aa15.81■□□□□ 0.12
VCP-207ENST00000493886 FAM237AA0A1B0GTK4 181 aa15.8■□□□□ 0.12
VCP-207ENST00000493886 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
VCP-207ENST00000493886 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
VCP-207ENST00000493886 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
VCP-207ENST00000493886 TBC1D16Q8TBP0 767 aa15.8■□□□□ 0.12
VCP-207ENST00000493886 TIGD1Q96MW7 591 aa15.8■□□□□ 0.12
VCP-207ENST00000493886 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.8■□□□□ 0.12
VCP-207ENST00000493886 TNNT1P13805 278 aa15.8■□□□□ 0.12
VCP-207ENST00000493886 TPD52L1Q16890 204 aaPredicted RBP15.8■□□□□ 0.12
VCP-207ENST00000493886 TGFBRAP1Q8WUH2 860 aa15.8■□□□□ 0.12
VCP-207ENST00000493886 RTFDC1Q9BY42 306 aaPredicted RBP15.8■□□□□ 0.12
VCP-207ENST00000493886 CLGNO14967 610 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 HMGB2P26583 209 aaKnown RBP15.79■□□□□ 0.12
VCP-207ENST00000493886 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
VCP-207ENST00000493886 AOPEPQ8N6M6 819 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 KRI1Q8N9T8 703 aaKnown RBP15.79■□□□□ 0.12
VCP-207ENST00000493886 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 USP27XA6NNY8 438 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 RCSD1Q6JBY9 416 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 DHX40Q8IX18 779 aaKnown RBP15.79■□□□□ 0.12
VCP-207ENST00000493886 AMOTL1Q8IY63 956 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 PHF20Q9BVI0 1012 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 NAT10Q9H0A0 1025 aaKnown RBP15.79■□□□□ 0.12
VCP-207ENST00000493886 CGNQ9P2M7 1197 aaKnown RBP15.79■□□□□ 0.12
VCP-207ENST00000493886 CNTNAP5Q8WYK1 1306 aa15.79■□□□□ 0.12
VCP-207ENST00000493886 BIN1O00499 593 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 NT5C2P49902 561 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 TFAP4Q01664 338 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 SRBD1Q8N5C6 995 aaKnown RBP15.78■□□□□ 0.12
VCP-207ENST00000493886 ROBO3Q96MS0 1386 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 CABP5Q9NP86 173 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 PCDHB6Q9Y5E3 794 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 C6orf229H3BNL8 230 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 BTDP43251 543 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 TRMT1Q9NXH9 659 aaKnown RBP15.78■□□□□ 0.12
VCP-207ENST00000493886 KRT2P35908 639 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 MFSD14BQ5SR56 506 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 SARM1Q6SZW1 724 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.78■□□□□ 0.12
VCP-207ENST00000493886 MKNK2Q9HBH9 465 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 NAV1Q8NEY1 1877 aa15.78■□□□□ 0.12
VCP-207ENST00000493886 RBM6P78332 1123 aaKnown RBP15.77■□□□□ 0.12
VCP-207ENST00000493886 ZNF827Q17R98 1081 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms