RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 CCAR2Q8N163 923 aaKnown RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 KIF18AQ8NI77 898 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 ENOX1Q8TC92 643 aaKnown RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 SH3GLB2Q9NR46 395 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 PCDHB6Q9Y5E3 794 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 A0A087WWV3 80 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 TSPY2A6NKD2 308 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 RFC4P35249 363 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 CFAP100Q494V2 611 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 ZNF804AQ7Z570 1209 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 FCHSD1Q86WN1 690 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 ANKS1AQ92625 1134 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 MYH6P13533 1939 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 MYH13Q9UKX3 1938 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 CCDC88AQ3V6T2 1871 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 NHSQ6T4R5 1651 aa11.02□□□□□ -0.65
NPHP3-209ENST00000493732 LDHBP07195 334 aaKnown RBP11.01□□□□□ -0.65
NPHP3-209ENST00000493732 SLFN14P0C7P3 912 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 SCG2P13521 617 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 GRAPQ13588 217 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 MORC3Q14149 939 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 GALNT17Q6IS24 598 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 SPATA20Q8TB22 786 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 GRAPLQ8TC17 118 aaPredicted RBP11.01□□□□□ -0.65
NPHP3-209ENST00000493732 ZNF384Q8TF68 577 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 C8orf37Q96NL8 207 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 VPS54Q9P1Q0 977 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 SERTAD1Q9UHV2 236 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 MAN1B1Q9UKM7 699 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 KIAA1551Q9HCM1 1747 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 CASZ1Q86V15 1759 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 UBE2Q2LH0YL09 131 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
NPHP3-209ENST00000493732 TM4SF1P30408 202 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 PPP4CP60510 307 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 PIP4K2BP78356 416 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
NPHP3-209ENST00000493732 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 CMTR1Q8N1G2 835 aaKnown RBP11.01□□□□□ -0.65
NPHP3-209ENST00000493732 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
NPHP3-209ENST00000493732 GSDMAQ96QA5 445 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 LZTS2Q9BRK4 669 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 CSRNP2Q9H175 543 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 KAT14Q9H8E8 782 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 TCP11L1Q9NUJ3 509 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 XDHP47989 1333 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 SPATA31A6Q5VVP1 1343 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
NPHP3-209ENST00000493732 LAMB1P07942 1786 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
NPHP3-209ENST00000493732 PRDM1O75626 825 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 CDK11BP21127 795 aaKnown RBP11□□□□□ -0.65
NPHP3-209ENST00000493732 USP5P45974 858 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 NLRP5P59047 1200 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 SEMA3FQ13275 785 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 TTC38Q5R3I4 469 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
NPHP3-209ENST00000493732 FOXP4Q8IVH2 680 aaPredicted RBP11□□□□□ -0.65
NPHP3-209ENST00000493732 SLF2Q8IX21 1173 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 MCM9Q9NXL9 1143 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 TFCP2L1Q9NZI6 479 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 SRP68Q9UHB9 627 aaKnown RBP11□□□□□ -0.65
NPHP3-209ENST00000493732 COL4A1P02462 1669 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 ROBO3Q96MS0 1386 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 MYH2Q9UKX2 1941 aa11□□□□□ -0.65
NPHP3-209ENST00000493732 CYP2D7A0A087X1C5 515 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 GOLGA6L9A6NEM1 432 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ZSCAN12O43309 604 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 PLEKHA8P1O95397 391 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 PLCG2P16885 1265 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 PRDX5P30044 214 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 PLCD1P51178 756 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ATP2C1P98194 919 aaPredicted RBP10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ARID5BQ14865 1188 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 C12orf60Q5U649 245 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ISM2Q6H9L7 571 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ARMCX5Q6P1M9 558 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 PDCL2Q8N4E4 241 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 IQUBQ8NA54 791 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ANKRD7Q92527 254 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 TNFRSF25Q93038 417 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 CTAGE1Q96RT6 745 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 HSD3B7Q9H2F3 369 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 FANCLQ9NW38 375 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 BTAF1O14981 1849 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
NPHP3-209ENST00000493732 ATP1A3P13637 1013 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 TXLNAP40222 546 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 SRBD1Q8N5C6 995 aaKnown RBP10.99□□□□□ -0.65
NPHP3-209ENST00000493732 CNBD1Q8NA66 436 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 CCDC148Q8NFR7 591 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 CCDC94Q9BW85 323 aaPredicted RBP10.99□□□□□ -0.65
NPHP3-209ENST00000493732 MKNK2Q9HBH9 465 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 USP21Q9UK80 565 aa10.99□□□□□ -0.65
NPHP3-209ENST00000493732 IRS2Q9Y4H2 1338 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms