RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 USP17L15C9J2P7 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L13C9JLJ4 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L11C9JVI0 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L18D6R9N7 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L22D6RA61 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L17D6RBQ6 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L19D6RCP7 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L20D6RJB6 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 CNMDO75829 334 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 HMGCRP04035 888 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 MAPK4P31152 587 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 ERVK-24P63145 666 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 EVX2Q03828 476 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L24Q0WX57 530 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 MORN1Q5T089 497 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 LCORLQ8N3X6 602 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 ACER1Q8TDN7 264 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 PRO3102Q9H379 93 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 BOLA2Q9H3K6 86 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 ATP8A2Q9NTI2 1148 aa10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 BIN2Q9UBW5 565 aaPredicted RBP10.14□□□□□ -0.79
SMARCB1-207ENST00000491967 MYH8P13535 1937 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 RPTORQ8N122 1335 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 A0A1W2PRG0 241 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 H0YGN5 161 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 APBB1O00213 710 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 PEX10O60683 326 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 POLR3DP05423 398 aaPredicted RBP10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 VCAM1P19320 739 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 SLFNL1Q499Z3 407 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 C12orf60Q5U649 245 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 SDR42E1Q8WUS8 393 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 SOCS4Q8WXH5 440 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 TRIB2Q92519 343 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 PORCNQ9H237 461 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 CABP5Q9NP86 173 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 MCM9Q9NXL9 1143 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 SWAP70Q9UH65 585 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 ALPK3Q96L96 1907 aa10.13□□□□□ -0.79
SMARCB1-207ENST00000491967 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 RANBP2P49792 3224 aaKnown RBP10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 GREB1LQ9C091 1923 aaPredicted RBP10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 PRKAB2O43741 272 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 FARP2O94887 1054 aaPredicted RBP10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 MBD4O95243 580 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 CHGBP05060 677 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 SEPT2Q15019 361 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 RAB3GAP1Q15042 981 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 GPR142Q7Z601 462 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 TRMT44Q8IYL2 757 aaKnown RBP10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 DEFB118Q96PH6 123 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 NUDT12Q9BQG2 462 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 ARMT1Q9H993 441 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 ECHDC1Q9NTX5 307 aa10.12□□□□□ -0.79
SMARCB1-207ENST00000491967 A0A0G2JMZ2 1700 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 SMARCA5O60264 1052 aaPredicted RBP10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 HOXC6P09630 235 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 CYP2D6P10635 497 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 TRIM32Q13049 653 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 KIAA1755Q5JYT7 1200 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 TMEM179Q6ZVK1 233 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 C16orf86Q6ZW13 317 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 PLEKHH3Q7Z736 793 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 SLC44A5Q8NCS7 719 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 CCDC17Q96LX7 622 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 STRBPQ96SI9 672 aaKnown RBP10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 HTATIP2Q9BUP3 242 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 PUS7LQ9H0K6 701 aaKnown RBP10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 HOXC10Q9NYD6 342 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 BTBD7Q9P203 1132 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 OGDHLQ9ULD0 1010 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 ADAMTS5Q9UNA0 930 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 COLQQ9Y215 455 aaPredicted RBP10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 TMX2Q9Y320 296 aa10.11□□□□□ -0.79
SMARCB1-207ENST00000491967 ZNFX1Q9P2E3 1918 aaKnown RBP10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 SLC15A5A6NIM6 579 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L12C9JPN9 530 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 USP17L21D6R901 530 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 SMIM22K7EJ46 135 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 TFRCP02786 760 aaKnown RBP10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 CYP2B6P20813 491 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 CDK8P49336 464 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 FXR1P51114 621 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 CCNA1P78396 465 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 COG2Q14746 738 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 SBK1Q52WX2 424 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 LHX8Q68G74 356 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 GIMAP6Q6P9H5 292 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 CTR9Q6PD62 1173 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 LPAR1Q92633 364 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 DYNLL2Q96FJ2 89 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 FEZ1Q99689 392 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms