RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
USF1-206ENST00000491629 TATDN1Q6P1N9 297 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 USP17L2Q6R6M4 530 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
USF1-206ENST00000491629 NPLOC4Q8TAT6 608 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 EDC3Q96F86 508 aaKnown RBP16.24■□□□□ 0.19
USF1-206ENST00000491629 SENP6Q9GZR1 1112 aaPredicted RBP16.24■□□□□ 0.19
USF1-206ENST00000491629 BTBD7Q9P203 1132 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 RABGAP1Q9Y3P9 1069 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 GNAI2P04899 355 aa16.23■□□□□ 0.19
USF1-206ENST00000491629 POLA2Q14181 598 aa16.23■□□□□ 0.19
USF1-206ENST00000491629 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
USF1-206ENST00000491629 ACER1Q8TDN7 264 aa16.23■□□□□ 0.19
USF1-206ENST00000491629 FAM161BQ96MY7 647 aa16.23■□□□□ 0.19
USF1-206ENST00000491629 NOL10Q9BSC4 688 aaKnown RBP16.23■□□□□ 0.19
USF1-206ENST00000491629 GPR108Q9NPR9 543 aa16.23■□□□□ 0.19
USF1-206ENST00000491629 SLC15A5A6NIM6 579 aa16.22■□□□□ 0.19
USF1-206ENST00000491629 PTPREP23469 700 aa16.22■□□□□ 0.19
USF1-206ENST00000491629 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
USF1-206ENST00000491629 TTC39AQ5SRH9 613 aa16.22■□□□□ 0.19
USF1-206ENST00000491629 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.22■□□□□ 0.19
USF1-206ENST00000491629 GTF3C2Q8WUA4 911 aaPredicted RBP16.22■□□□□ 0.19
USF1-206ENST00000491629 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
USF1-206ENST00000491629 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
USF1-206ENST00000491629 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 HOXC6P09630 235 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 VCAM1P19320 739 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 CYP2C19P33261 490 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 GUCY1A2P33402 732 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 EVX2Q03828 476 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 GRB14Q14449 540 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 LBX2Q6XYB7 198 aa16.21■□□□□ 0.19
USF1-206ENST00000491629 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
USF1-206ENST00000491629 ZNF512BQ96KM6 892 aaPredicted RBP16.21■□□□□ 0.19
USF1-206ENST00000491629 DDX20Q9UHI6 824 aaKnown RBP16.21■□□□□ 0.19
USF1-206ENST00000491629 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
USF1-206ENST00000491629 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
USF1-206ENST00000491629 SPDYE16A6NNV3 312 aaPredicted RBP16.2■□□□□ 0.18
USF1-206ENST00000491629 BCAR3O75815 825 aa16.2■□□□□ 0.18
USF1-206ENST00000491629 RTP1P59025 263 aa16.2■□□□□ 0.18
USF1-206ENST00000491629 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
USF1-206ENST00000491629 SSH3Q8TE77 659 aa16.2■□□□□ 0.18
USF1-206ENST00000491629 LPAR1Q92633 364 aa16.2■□□□□ 0.18
USF1-206ENST00000491629 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
USF1-206ENST00000491629 TRIM34Q9BYJ4 488 aa16.2■□□□□ 0.18
USF1-206ENST00000491629 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 CYBAP13498 195 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 CYP7A1P22680 504 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 SHMT1P34896 483 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 CCDC158Q5M9N0 1113 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 C9orf50Q5SZB4 431 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 MFSD14CQ5VZR4 134 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 KIAA1683Q9H0B3 1180 aa16.19■□□□□ 0.18
USF1-206ENST00000491629 CNGA1P29973 690 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 PLCD1P51178 756 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 RAB3GAP1Q15042 981 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 SHHQ15465 462 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
USF1-206ENST00000491629 WDR78Q5VTH9 848 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 EHD4Q9H223 541 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 ANTXR1Q9H6X2 564 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 SERPINB13Q9UIV8 391 aa16.18■□□□□ 0.18
USF1-206ENST00000491629 A0A1W2PRG0 241 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 DNM1LO00429 736 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 CCNA1P78396 465 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 ATP8B2P98198 1209 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 ATP2B2Q01814 1243 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 TMEM57Q8N5G2 664 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 EAF2Q96CJ1 260 aaPredicted RBP16.17■□□□□ 0.18
USF1-206ENST00000491629 FEZ1Q99689 392 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 CCDC8Q9H0W5 538 aaPredicted RBP16.17■□□□□ 0.18
USF1-206ENST00000491629 RPAP3Q9H6T3 665 aaPredicted RBP16.17■□□□□ 0.18
USF1-206ENST00000491629 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
USF1-206ENST00000491629 COBLO75128 1261 aa16.16■□□□□ 0.18
USF1-206ENST00000491629 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 GLRX3O76003 335 aaKnown RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 USP14P54578 494 aa16.16■□□□□ 0.18
USF1-206ENST00000491629 ABCB5Q2M3G0 1257 aa16.16■□□□□ 0.18
USF1-206ENST00000491629 CERKLQ49MI3 558 aaPredicted RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 SLC39A5Q6ZMH5 540 aa16.16■□□□□ 0.18
USF1-206ENST00000491629 SH3RF1Q7Z6J0 888 aa16.16■□□□□ 0.18
USF1-206ENST00000491629 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
USF1-206ENST00000491629 CDX2Q99626 313 aaPredicted RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 LBHD1Q9BQE6 289 aaPredicted RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 RIOK1Q9BRS2 568 aaKnown RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 MOV10L1Q9BXT6 1211 aaKnown RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 TTYH1Q9H313 450 aaPredicted RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms