RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 GJA8P48165 433 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 GABPAQ06546 454 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 PAGR1Q9BTK6 254 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 UNC93B1Q9H1C4 597 aa11.75□□□□□ -0.53
HDAC7-225ENST00000491464 BRCA2P51587 3418 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 HMGCRP04035 888 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 CAPN2P17655 700 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 MAPK4P31152 587 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 ERVK-24P63145 666 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 CCNA1P78396 465 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 SEPT2Q15019 361 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 TMEM179Q6ZVK1 233 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 U2AF1L4Q8WU68 220 aaKnown RBP11.74□□□□□ -0.53
HDAC7-225ENST00000491464 SOCS4Q8WXH5 440 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
HDAC7-225ENST00000491464 SLC4A4Q9Y6R1 1079 aa11.74□□□□□ -0.53
HDAC7-225ENST00000491464 PRKAB2O43741 272 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 CYP2D6P10635 497 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 VCAM1P19320 739 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 RRP1P56182 461 aaKnown RBP11.73□□□□□ -0.53
HDAC7-225ENST00000491464 LRRFIP1Q32MZ4 808 aaKnown RBP11.73□□□□□ -0.53
HDAC7-225ENST00000491464 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 HTATIP2Q9BUP3 242 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 ARHGEF10LQ9HCE6 1279 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 RBPJLQ9UBG7 517 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 RABGAP1Q9Y3P9 1069 aa11.73□□□□□ -0.53
HDAC7-225ENST00000491464 USP17L12C9JPN9 530 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 USP17L21D6R901 530 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 ERC2O15083 957 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
HDAC7-225ENST00000491464 FARP2O94887 1054 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-225ENST00000491464 SLC34A2O95436 690 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 SGPL1O95470 568 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
HDAC7-225ENST00000491464 CYP2B6P20813 491 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 GUCY1A2P33402 732 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
HDAC7-225ENST00000491464 KBTBD3Q8NAB2 608 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 CCDC17Q96LX7 622 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 DEFB118Q96PH6 123 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 RPAP3Q9H6T3 665 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-225ENST00000491464 GJD2Q9UKL4 321 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 PLXNB2O15031 1838 aa11.72□□□□□ -0.53
HDAC7-225ENST00000491464 TTC41PQ6P2S7 1318 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 PEX10O60683 326 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 ZFYP08048 801 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-225ENST00000491464 RGS2P41220 211 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 EVX2Q03828 476 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 ICA1Q05084 483 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 WDR78Q5VTH9 848 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 TSHZ3Q63HK5 1081 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 GPR142Q7Z601 462 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 PLEKHH3Q7Z736 793 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 APPBP2Q92624 585 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 DPF3Q92784 378 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 TANGO6Q9C0B7 1094 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.71□□□□□ -0.53
HDAC7-225ENST00000491464 PUS7LQ9H0K6 701 aaKnown RBP11.71□□□□□ -0.53
HDAC7-225ENST00000491464 HMX1Q9NP08 348 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-225ENST00000491464 PAK6Q9NQU5 681 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-225ENST00000491464 ARPP21Q9UBL0 812 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-225ENST00000491464 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.53
HDAC7-225ENST00000491464 RPTORQ8N122 1335 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 CYP2D7A0A087X1C5 515 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 RNF113AO15541 343 aaKnown RBP11.7□□□□□ -0.54
HDAC7-225ENST00000491464 CHGBP05060 677 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 XRCC5P13010 732 aaKnown RBP11.7□□□□□ -0.54
HDAC7-225ENST00000491464 AKR1B1P15121 316 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
HDAC7-225ENST00000491464 CDK8P49336 464 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 Q3C1V9 767 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 LBX2Q6XYB7 198 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 C16orf86Q6ZW13 317 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 LPAR1Q92633 364 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 YTHDC1Q96MU7 727 aaKnown RBP11.7□□□□□ -0.54
HDAC7-225ENST00000491464 PORCNQ9H237 461 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 HOXC10Q9NYD6 342 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 PCDHB15Q9Y5E8 787 aa11.7□□□□□ -0.54
HDAC7-225ENST00000491464 A0A1W2PRG0 241 aa11.69□□□□□ -0.54
HDAC7-225ENST00000491464 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
HDAC7-225ENST00000491464 GNAT2P19087 354 aa11.69□□□□□ -0.54
HDAC7-225ENST00000491464 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
HDAC7-225ENST00000491464 COG2Q14746 738 aa11.69□□□□□ -0.54
HDAC7-225ENST00000491464 GIMAP6Q6P9H5 292 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms