RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ATP8A2Q9NTI2 1148 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 ATAD5Q96QE3 1844 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 USP17L15C9J2P7 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L13C9JLJ4 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L11C9JVI0 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L18D6R9N7 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L22D6RA61 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L17D6RBQ6 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L19D6RCP7 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L20D6RJB6 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 PEX10O60683 326 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 CHGBP05060 677 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 VCAM1P19320 739 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 GUCY1A2P33402 732 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 GJA8P48165 433 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 RRP1P56182 461 aaKnown RBP9.95□□□□□ -0.82
LSM2-213ENST00000491421 USP17L24Q0WX57 530 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 SEPT2Q15019 361 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 TSHZ3Q63HK5 1081 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 CCAR1Q8IX12 1150 aaKnown RBP9.95□□□□□ -0.82
LSM2-213ENST00000491421 SLC44A5Q8NCS7 719 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 DYNLL2Q96FJ2 89 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 PAGR1Q9BTK6 254 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 RBPJLQ9UBG7 517 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 SWAP70Q9UH65 585 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 SLC4A4Q9Y6R1 1079 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 DDX60LQ5H9U9 1706 aaKnown RBP9.95□□□□□ -0.82
LSM2-213ENST00000491421 CDK5RAP2Q96SN8 1893 aa9.95□□□□□ -0.82
LSM2-213ENST00000491421 KIAA0100Q14667 2235 aaKnown RBP9.95□□□□□ -0.82
LSM2-213ENST00000491421 HMGCRP04035 888 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 MAPK4P31152 587 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 ERVK-9P63128 1117 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 ERVK-24P63145 666 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
LSM2-213ENST00000491421 TMEM179Q6ZVK1 233 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 U2AF1L4Q8WU68 220 aaKnown RBP9.94□□□□□ -0.82
LSM2-213ENST00000491421 SOCS4Q8WXH5 440 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 YTHDC1Q96MU7 727 aaKnown RBP9.94□□□□□ -0.82
LSM2-213ENST00000491421 PUS7LQ9H0K6 701 aaKnown RBP9.94□□□□□ -0.82
LSM2-213ENST00000491421 GJD2Q9UKL4 321 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 PCDHB15Q9Y5E8 787 aa9.94□□□□□ -0.82
LSM2-213ENST00000491421 CYP2D7A0A087X1C5 515 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 USP17L21D6R901 530 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 C12orf60Q5U649 245 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 CATSPERGQ6ZRH7 1159 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 KBTBD3Q8NAB2 608 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 GCC1Q96CN9 775 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 DEFB118Q96PH6 123 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 RPAP3Q9H6T3 665 aaPredicted RBP9.93□□□□□ -0.82
LSM2-213ENST00000491421 CWC22Q9HCG8 908 aaKnown RBP9.93□□□□□ -0.82
LSM2-213ENST00000491421 RABGAP1Q9Y3P9 1069 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 MYH1P12882 1939 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 NAV1Q8NEY1 1877 aa9.93□□□□□ -0.82
LSM2-213ENST00000491421 A0A1W2PRG0 241 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 ERC2O15083 957 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 RNF113AO15541 343 aaKnown RBP9.92□□□□□ -0.82
LSM2-213ENST00000491421 CNMDO75829 334 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 FARP2O94887 1054 aaPredicted RBP9.92□□□□□ -0.82
LSM2-213ENST00000491421 SLC34A2O95436 690 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 SGPL1O95470 568 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 TFRCP02786 760 aaKnown RBP9.92□□□□□ -0.82
LSM2-213ENST00000491421 ZFYP08048 801 aaPredicted RBP9.92□□□□□ -0.82
LSM2-213ENST00000491421 AKR1B1P15121 316 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 CYP2B6P20813 491 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 CDK8P49336 464 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 CCNA1P78396 465 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 ICA1Q05084 483 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 Q3C1V9 767 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 CTR9Q6PD62 1173 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 C16orf86Q6ZW13 317 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 GPR142Q7Z601 462 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 PLEKHH3Q7Z736 793 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 CLEC10AQ8IUN9 316 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 TRIB2Q92519 343 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 APPBP2Q92624 585 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 CCDC17Q96LX7 622 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 STRBPQ96SI9 672 aaKnown RBP9.92□□□□□ -0.82
LSM2-213ENST00000491421 TANGO6Q9C0B7 1094 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.92□□□□□ -0.82
LSM2-213ENST00000491421 PORCNQ9H237 461 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 SH2D4AQ9H788 454 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
LSM2-213ENST00000491421 PAK6Q9NQU5 681 aaPredicted RBP9.92□□□□□ -0.82
LSM2-213ENST00000491421 ARPP21Q9UBL0 812 aaPredicted RBP9.92□□□□□ -0.82
LSM2-213ENST00000491421 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 SMIM22K7EJ46 135 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 GLRX3O76003 335 aaKnown RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 XRCC5P13010 732 aaKnown RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 ZKSCAN1P17029 563 aaPredicted RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 CAPN2P17655 700 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 RGS2P41220 211 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 TRIM32Q13049 653 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 LRRFIP1Q32MZ4 808 aaKnown RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 WDR78Q5VTH9 848 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 LBX2Q6XYB7 198 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 UBE2Q1Q7Z7E8 422 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms