RNA–Protein interactions for RNA: ENST00000491206.5

RFC2-209, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-209ENST00000491206 SPTLC2O15270 562 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 ORC4O43929 436 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 PPP6R2O75170 966 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 OFD1O75665 1012 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 PTMAP06454 111 aaKnown RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 PTPREP23469 700 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 HMGB2P26583 209 aaKnown RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 RFC4P35249 363 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 KCNQ4P56696 695 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 CEBPZQ03701 1054 aaKnown RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 SSRP1Q08945 709 aaKnown RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 GRAPQ13588 217 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 TRIM29Q14134 588 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 SLC39A14Q15043 492 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 SEC23AQ15436 765 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 RTN1Q16799 776 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 TPRNQ4KMQ1 711 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 ANO6Q4KMQ2 910 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 TRAPPC3LQ5T215 181 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 SPTY2D1Q68D10 685 aaPredicted RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 OTUD7BQ6GQQ9 843 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 RAB11FIP4Q86YS3 637 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 CKAP2LQ8IYA6 745 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 TRIM22Q8IYM9 498 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 FMR1NBQ8N0W7 255 aaPredicted RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 GRAPLQ8TC17 118 aaPredicted RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 ZNF384Q8TF68 577 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 NSUN4Q96CB9 384 aaKnown RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 UBAC1Q9BSL1 405 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 CRNKL1Q9BZJ0 848 aaKnown RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 PCDHA7Q9UN72 937 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 IQSEC3Q9UPP2 1182 aaPredicted RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.9□□□□□ -1.3
RFC2-209ENST00000491206 LEMD3Q9Y2U8 911 aa6.9□□□□□ -1.3
RFC2-209ENST00000491206 MORC2Q9Y6X9 1032 aaPredicted RBP6.9□□□□□ -1.3
RFC2-209ENST00000491206 LTBP1Q14766 1721 aa6.9□□□□□ -1.31
RFC2-209ENST00000491206 DDX60LQ5H9U9 1706 aaKnown RBP6.9□□□□□ -1.31
RFC2-209ENST00000491206 NAV1Q8NEY1 1877 aa6.9□□□□□ -1.31
RFC2-209ENST00000491206 GOLGA6L6A8MZA4 724 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 FOXN1O15353 648 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 DDAH1O94760 285 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 DEXIO95424 95 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 MMP1P03956 469 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 POLR3DP05423 398 aaPredicted RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 CALM1P0DP23 149 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 CALM2P0DP24 149 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 CALM3P0DP25 149 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 RXRAP19793 462 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 CMA1P23946 247 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 KLRK1P26718 216 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 ZNF165P49910 485 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 MECOMQ03112 1051 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 KIAA2012Q0VF49 1180 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 NFIXQ14938 502 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 PTPAQ15257 358 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 SF3A1Q15459 793 aaKnown RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 CRY2Q49AN0 593 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 SBK1Q52WX2 424 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 SLC27A3Q5K4L6 730 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 AXDND1Q5T1B0 1012 aaPredicted RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 SARM1Q6SZW1 724 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 NBPF11Q86T75 865 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 AMIGO3Q86WK7 504 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 CERS3Q8IU89 383 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 ZNF654Q8IZM8 581 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 CNBD1Q8NA66 436 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 FBXO22Q8NEZ5 403 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 SDR42E1Q8WUS8 393 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 PHKBQ93100 1093 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 TIGD1Q96MW7 591 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 AIFM3Q96NN9 605 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.89□□□□□ -1.31
RFC2-209ENST00000491206 SLC26A6Q9BXS9 759 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 RNF26Q9BY78 433 aaPredicted RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 FOXP1Q9H334 677 aaPredicted RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 ATP8A2Q9NTI2 1148 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 RBM28Q9NW13 759 aaKnown RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 ANO10Q9NW15 660 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 ARPP21Q9UBL0 812 aaPredicted RBP6.89□□□□□ -1.31
RFC2-209ENST00000491206 CLIC4Q9Y696 253 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
RFC2-209ENST00000491206 TNKSO95271 1327 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 XDHP47989 1333 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 ROBO3Q96MS0 1386 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 MYH6P13533 1939 aa6.89□□□□□ -1.31
RFC2-209ENST00000491206 MYH2Q9UKX2 1941 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 NRXN2Q9P2S2 1712 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 MROH7-TTC4A0A0A0MT08 1334 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 WTIPA6NIX2 430 aaPredicted RBP6.88□□□□□ -1.31
RFC2-209ENST00000491206 AP5Z1O43299 807 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 PPFIA3O75145 1194 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 SLC3A2P08195 630 aaKnown RBP6.88□□□□□ -1.31
RFC2-209ENST00000491206 CDC25BP30305 580 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 TERF1P54274 439 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 DYNLL1P63167 89 aaKnown RBP6.88□□□□□ -1.31
RFC2-209ENST00000491206 FUT2Q10981 343 aa6.88□□□□□ -1.31
RFC2-209ENST00000491206 IQCB1Q15051 598 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms