RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 CATSPERGQ6ZRH7 1159 aa18.97■□□□□ 0.63
COL2A1-207ENST00000490609 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
COL2A1-207ENST00000490609 NUDT12Q9BQG2 462 aa18.97■□□□□ 0.63
COL2A1-207ENST00000490609 FLRT1Q9NZU1 646 aa18.97■□□□□ 0.63
COL2A1-207ENST00000490609 SERPINB13Q9UIV8 391 aa18.97■□□□□ 0.63
COL2A1-207ENST00000490609 TCRBV5S4A2TA0A5A2 114 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 COL6A1P12109 1028 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 CCND3P30281 292 aaPredicted RBP18.96■□□□□ 0.63
COL2A1-207ENST00000490609 AACSQ86V21 672 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 LRCH3Q96II8 777 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 PAGR1Q9BTK6 254 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 BTBD7Q9P203 1132 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 MYH7P12883 1935 aa18.96■□□□□ 0.63
COL2A1-207ENST00000490609 SMCHD1A6NHR9 2005 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 A0A1W2PRG0 241 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 MAPK4P31152 587 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 USP5P45974 858 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 ZYXQ15942 572 aaKnown RBP18.95■□□□□ 0.62
COL2A1-207ENST00000490609 SLFNL1Q499Z3 407 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 CERKLQ49MI3 558 aaPredicted RBP18.95■□□□□ 0.62
COL2A1-207ENST00000490609 RHPN1Q8TCX5 695 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 TRIM34Q9BYJ4 488 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 NBPF3Q9H094 633 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 KIAA1683Q9H0B3 1180 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 EYSQ5T1H1 3165 aa18.95■□□□□ 0.62
COL2A1-207ENST00000490609 A0A0G2JMZ2 1700 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 A0A1W2PPC1 479 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 SMIM22K7EJ46 135 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 VCAM1P19320 739 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 BMP8BP34820 402 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 KIAA1755Q5JYT7 1200 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 LBX2Q6XYB7 198 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 PLEKHH3Q7Z736 793 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 C7orf61Q8IZ16 206 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 SOCS4Q8WXH5 440 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 EDC3Q96F86 508 aaKnown RBP18.94■□□□□ 0.62
COL2A1-207ENST00000490609 C11orf49Q9H6J7 331 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 ZMYND8Q9ULU4 1186 aaPredicted RBP18.94■□□□□ 0.62
COL2A1-207ENST00000490609 RABGAP1Q9Y3P9 1069 aa18.94■□□□□ 0.62
COL2A1-207ENST00000490609 COL11A1P12107 1806 aaPredicted RBP18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L15C9J2P7 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L13C9JLJ4 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L11C9JVI0 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L18D6R9N7 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L22D6RA61 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L17D6RBQ6 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L19D6RCP7 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L20D6RJB6 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 PDE6AP16499 860 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 USP17L24Q0WX57 530 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 MAP3K12Q12852 859 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 RAB3GAP1Q15042 981 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 ABCB5Q2M3G0 1257 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 SIAH1Q8IUQ4 282 aa18.93■□□□□ 0.62
COL2A1-207ENST00000490609 CUL9Q8IWT3 2517 aa18.92■□□□□ 0.62
COL2A1-207ENST00000490609 SPDYE16A6NNV3 312 aaPredicted RBP18.92■□□□□ 0.62
COL2A1-207ENST00000490609 CHGBP05060 677 aa18.92■□□□□ 0.62
COL2A1-207ENST00000490609 SYN1P17600 705 aa18.92■□□□□ 0.62
COL2A1-207ENST00000490609 SEPT2Q15019 361 aa18.92■□□□□ 0.62
COL2A1-207ENST00000490609 TMED8Q6PL24 325 aaPredicted RBP18.92■□□□□ 0.62
COL2A1-207ENST00000490609 TTC6Q86TZ1 520 aa18.92■□□□□ 0.62
COL2A1-207ENST00000490609 CERS3Q8IU89 383 aa18.92■□□□□ 0.62
COL2A1-207ENST00000490609 GTF3C2Q8WUA4 911 aaPredicted RBP18.92■□□□□ 0.62
COL2A1-207ENST00000490609 MAGEB6P1A0A0J9YX57 407 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 CYP2D6P10635 497 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 ZKSCAN1P17029 563 aaPredicted RBP18.91■□□□□ 0.62
COL2A1-207ENST00000490609 RGS2P41220 211 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 MAP2K5Q13163 448 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 SLC9C2Q5TAH2 1124 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 ERC1Q8IUD2 1116 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 TRPV1Q8NER1 839 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 NPLOC4Q8TAT6 608 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 ZNF532Q9HCE3 1301 aa18.91■□□□□ 0.62
COL2A1-207ENST00000490609 ZNF236Q9UL36 1845 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 PTPREP23469 700 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 LRRC26Q2I0M4 334 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 TRMT44Q8IYL2 757 aaKnown RBP18.9■□□□□ 0.62
COL2A1-207ENST00000490609 LCORLQ8N3X6 602 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 SLC44A5Q8NCS7 719 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 SDR42E1Q8WUS8 393 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 APBA2Q99767 749 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 RPAP3Q9H6T3 665 aaPredicted RBP18.9■□□□□ 0.62
COL2A1-207ENST00000490609 DCP1AQ9NPI6 582 aaPredicted RBP18.9■□□□□ 0.62
COL2A1-207ENST00000490609 ZBTB40Q9NUA8 1239 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 PRUNE2Q8WUY3 3088 aa18.9■□□□□ 0.62
COL2A1-207ENST00000490609 PRKAB2O43741 272 aa18.89■□□□□ 0.61
COL2A1-207ENST00000490609 HOXC6P09630 235 aa18.89■□□□□ 0.61
COL2A1-207ENST00000490609 MAGEA10P43363 369 aaPredicted RBP18.89■□□□□ 0.61
COL2A1-207ENST00000490609 USP14P54578 494 aa18.89■□□□□ 0.61
COL2A1-207ENST00000490609 PDE3AQ14432 1141 aa18.89■□□□□ 0.61
COL2A1-207ENST00000490609 GRB14Q14449 540 aa18.89■□□□□ 0.61
COL2A1-207ENST00000490609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.89■□□□□ 0.61
COL2A1-207ENST00000490609 FEZ1Q99689 392 aa18.89■□□□□ 0.61
COL2A1-207ENST00000490609 ZBED9Q6R2W3 1325 aa18.89■□□□□ 0.61
COL2A1-207ENST00000490609 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
COL2A1-207ENST00000490609 GOLIM4O00461 696 aa18.88■□□□□ 0.61
COL2A1-207ENST00000490609 DYNLL2Q96FJ2 89 aa18.88■□□□□ 0.61
COL2A1-207ENST00000490609 APBB1O00213 710 aa18.87■□□□□ 0.61
COL2A1-207ENST00000490609 POLR3DP05423 398 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms