RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
ABCD4-214ENST00000489678 PDLIM2Q96JY6 352 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 TMOD2Q9NZR1 351 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
ABCD4-214ENST00000489678 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 C15orf52Q6ZUT6 534 aaKnown RBP12.03□□□□□ -0.48
ABCD4-214ENST00000489678 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 CEP95Q96GE4 821 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 CLIP2Q9UDT6 1046 aa12.03□□□□□ -0.48
ABCD4-214ENST00000489678 POLR2AP24928 1970 aaKnown RBP12.02□□□□□ -0.48
ABCD4-214ENST00000489678 ATP2B1P20020 1258 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 UBE2HP62256 183 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 KRT32Q14532 448 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 KRT26Q7Z3Y9 468 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 MYO1BO43795 1136 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 KCTD1Q719H9 257 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 NBPF11Q86T75 865 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
ABCD4-214ENST00000489678 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.02□□□□□ -0.49
ABCD4-214ENST00000489678 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 SERPINB13Q9UIV8 391 aa12.02□□□□□ -0.49
ABCD4-214ENST00000489678 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
ABCD4-214ENST00000489678 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 TSPY26PQ9H489 355 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 ATP6V1DQ9Y5K8 247 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 CDC27P30260 824 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 EPHX2P34913 555 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 DHX32Q7L7V1 743 aaKnown RBP12.01□□□□□ -0.49
ABCD4-214ENST00000489678 ENAHQ8N8S7 591 aaPredicted RBP12.01□□□□□ -0.49
ABCD4-214ENST00000489678 ANP32BQ92688 251 aaKnown RBP12.01□□□□□ -0.49
ABCD4-214ENST00000489678 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 SYAP1Q96A49 352 aaPredicted RBP12.01□□□□□ -0.49
ABCD4-214ENST00000489678 CTNNA3Q9UI47 895 aa12.01□□□□□ -0.49
ABCD4-214ENST00000489678 RASA1P20936 1047 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 SCRN1Q12765 414 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 PAXIP1Q6ZW49 1069 aaPredicted RBP12□□□□□ -0.49
ABCD4-214ENST00000489678 MB21D2Q8IYB1 491 aaPredicted RBP12□□□□□ -0.49
ABCD4-214ENST00000489678 GAKO14976 1311 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 PLEKHA8P1O95397 391 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 GUCY1A2P33402 732 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 MCM5P33992 734 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 PDCL3Q9H2J4 239 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 MKRN1Q9UHC7 482 aaKnown RBP12□□□□□ -0.49
ABCD4-214ENST00000489678 LAMA4Q16363 1823 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 POTECB2RU33 542 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 TTC6Q86TZ1 520 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 AMOTL1Q8IY63 956 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 GPC2Q8N158 579 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 SERPINA10Q9UK55 444 aa12□□□□□ -0.49
ABCD4-214ENST00000489678 LTBP1Q14766 1721 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 SHMT1P34896 483 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 IFIT1BQ5T764 474 aaKnown RBP11.99□□□□□ -0.49
ABCD4-214ENST00000489678 WRNIP1Q96S55 665 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 KIAA1551Q9HCM1 1747 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 SALL1Q9NSC2 1324 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 WTAPQ15007 396 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 CERKLQ49MI3 558 aaPredicted RBP11.99□□□□□ -0.49
ABCD4-214ENST00000489678 HHIPL2Q6UWX4 724 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 ATP8A2Q9NTI2 1148 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 CDH23Q9H251 3354 aa11.99□□□□□ -0.49
ABCD4-214ENST00000489678 CNTNAP1P78357 1384 aa11.98□□□□□ -0.49
ABCD4-214ENST00000489678 CCDC69A6NI79 296 aa11.98□□□□□ -0.49
ABCD4-214ENST00000489678 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
ABCD4-214ENST00000489678 ADAMTS3O15072 1205 aa11.98□□□□□ -0.49
ABCD4-214ENST00000489678 EXOSC10Q01780 885 aaKnown RBP11.98□□□□□ -0.49
ABCD4-214ENST00000489678 PDE4BQ07343 736 aa11.98□□□□□ -0.49
ABCD4-214ENST00000489678 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
ABCD4-214ENST00000489678 LRRC37AA6NMS7 1700 aa11.98□□□□□ -0.49
ABCD4-214ENST00000489678 USP17L5A8MUK1 530 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 PDCP20941 246 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 ESR2Q92731 530 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 GPKOWQ92917 476 aaPredicted RBP eCLIP11.97□□□□□ -0.492e-6■■■■■ 39.1
ABCD4-214ENST00000489678 FTOQ9C0B1 505 aaKnown RBP eCLIP11.97□□□□□ -0.49
ABCD4-214ENST00000489678 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
ABCD4-214ENST00000489678 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
ABCD4-214ENST00000489678 ANGEL1Q9UNK9 670 aaKnown RBP11.97□□□□□ -0.49
ABCD4-214ENST00000489678 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 A0A1W2PRG0 241 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 ERICH2A1L162 156 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 GLTPD2A6NH11 291 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 CPLX1O14810 134 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 GNAT2P19087 354 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 PDIA3P30101 505 aaKnown RBP11.97□□□□□ -0.49
ABCD4-214ENST00000489678 PPP4CP60510 307 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 CCDC96Q2M329 555 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 KIAA1755Q5JYT7 1200 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 AGBL3Q8NEM8 1001 aa11.97□□□□□ -0.49
ABCD4-214ENST00000489678 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
ABCD4-214ENST00000489678 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms