RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 DHX36Q9H2U1 1008 aaKnown RBP14□□□□□ -0.17
USP11-210ENST00000489030 FPGT-TNNI3KV9GXZ4 949 aa14□□□□□ -0.17
USP11-210ENST00000489030 UQCRFS1P1P0C7P4 283 aa13.99□□□□□ -0.17
USP11-210ENST00000489030 RGS2P41220 211 aa13.99□□□□□ -0.17
USP11-210ENST00000489030 G3BP1Q13283 466 aaKnown RBP eCLIP13.99□□□□□ -0.17
USP11-210ENST00000489030 FOXP4Q8IVH2 680 aaPredicted RBP13.99□□□□□ -0.17
USP11-210ENST00000489030 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
USP11-210ENST00000489030 NPLOC4Q8TAT6 608 aa13.99□□□□□ -0.17
USP11-210ENST00000489030 COL25A1Q9BXS0 654 aaPredicted RBP13.99□□□□□ -0.17
USP11-210ENST00000489030 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
USP11-210ENST00000489030 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
USP11-210ENST00000489030 MAP2K5Q13163 448 aa13.98□□□□□ -0.17
USP11-210ENST00000489030 POLA2Q14181 598 aa13.98□□□□□ -0.17
USP11-210ENST00000489030 TTC39AQ5SRH9 613 aa13.98□□□□□ -0.17
USP11-210ENST00000489030 USP17L2Q6R6M4 530 aa13.98□□□□□ -0.17
USP11-210ENST00000489030 MIGA1Q8NAN2 632 aa13.98□□□□□ -0.17
USP11-210ENST00000489030 C1orf115Q9H7X2 142 aa13.98□□□□□ -0.17
USP11-210ENST00000489030 FOCADQ5VW36 1801 aa13.97□□□□□ -0.17
USP11-210ENST00000489030 MAST2Q6P0Q8 1798 aa13.97□□□□□ -0.17
USP11-210ENST00000489030 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
USP11-210ENST00000489030 BAG3O95817 575 aa13.97□□□□□ -0.17
USP11-210ENST00000489030 IGHA2P01877 340 aa13.97□□□□□ -0.17
USP11-210ENST00000489030 CYP2C19P33261 490 aa13.97□□□□□ -0.17
USP11-210ENST00000489030 GUCY1A2P33402 732 aa13.97□□□□□ -0.17
USP11-210ENST00000489030 RPAP2Q8IXW5 612 aaPredicted RBP13.97□□□□□ -0.17
USP11-210ENST00000489030 NOL10Q9BSC4 688 aaKnown RBP13.97□□□□□ -0.17
USP11-210ENST00000489030 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
USP11-210ENST00000489030 DBNLQ9UJU6 430 aaKnown RBP13.97□□□□□ -0.17
USP11-210ENST00000489030 UNC80Q8N2C7 3258 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 PLCG2P16885 1265 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 VCAM1P19320 739 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 CYP7A1P22680 504 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 ATP8B2P98198 1209 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 WDR78Q5VTH9 848 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 TATDN1Q6P1N9 297 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 CATSPERGQ6ZRH7 1159 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 EDC3Q96F86 508 aaKnown RBP13.96□□□□□ -0.17
USP11-210ENST00000489030 C12orf42Q96LP6 360 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 TRIM34Q9BYJ4 488 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 ANTXR1Q9H6X2 564 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 RABGAP1Q9Y3P9 1069 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 FRMPD3Q5JV73 1810 aa13.96□□□□□ -0.17
USP11-210ENST00000489030 LAMA2P24043 3122 aaKnown RBP13.96□□□□□ -0.18
USP11-210ENST00000489030 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
USP11-210ENST00000489030 PTPREP23469 700 aa13.95□□□□□ -0.18
USP11-210ENST00000489030 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
USP11-210ENST00000489030 ANO1Q5XXA6 986 aa13.95□□□□□ -0.18
USP11-210ENST00000489030 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
USP11-210ENST00000489030 TRMT44Q8IYL2 757 aaKnown RBP13.95□□□□□ -0.18
USP11-210ENST00000489030 CCDC8Q9H0W5 538 aaPredicted RBP13.95□□□□□ -0.18
USP11-210ENST00000489030 GPR108Q9NPR9 543 aa13.95□□□□□ -0.18
USP11-210ENST00000489030 DDX20Q9UHI6 824 aaKnown RBP13.95□□□□□ -0.18
USP11-210ENST00000489030 DNAH12Q6ZR08 3092 aa13.95□□□□□ -0.18
USP11-210ENST00000489030 SLC15A5A6NIM6 579 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 HMMRO75330 724 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 CNGA1P29973 690 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 SHMT1P34896 483 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 PLCD1P51178 756 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 RTP1P59025 263 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 GRB14Q14449 540 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 RAB3GAP1Q15042 981 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 CCDC158Q5M9N0 1113 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 C9orf50Q5SZB4 431 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 GJC2Q5T442 439 aaPredicted RBP13.94□□□□□ -0.18
USP11-210ENST00000489030 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
USP11-210ENST00000489030 SSH3Q8TE77 659 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
USP11-210ENST00000489030 FEZ1Q99689 392 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 GINM1Q9NU53 330 aa13.94□□□□□ -0.18
USP11-210ENST00000489030 A0A1W2PRG0 241 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 SURF6O75683 361 aaKnown RBP13.93□□□□□ -0.18
USP11-210ENST00000489030 IDH1O75874 414 aaKnown RBP13.93□□□□□ -0.18
USP11-210ENST00000489030 HLA-DOAP06340 250 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 CYBAP13498 195 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 SHHQ15465 462 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 MFSD14CQ5VZR4 134 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 CEP85Q6P2H3 762 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 MAGEB6Q8N7X4 407 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 GTF3C2Q8WUA4 911 aaPredicted RBP13.93□□□□□ -0.18
USP11-210ENST00000489030 KIAA1683Q9H0B3 1180 aa13.93□□□□□ -0.18
USP11-210ENST00000489030 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
USP11-210ENST00000489030 SMIM22K7EJ46 135 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 COBLO75128 1261 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 HOXC6P09630 235 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 USP5P45974 858 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 ATP2B2Q01814 1243 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 OS9Q13438 667 aaPredicted RBP13.92□□□□□ -0.18
USP11-210ENST00000489030 SEPT2Q15019 361 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 ABCB5Q2M3G0 1257 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms