RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 CERKLQ49MI3 558 aaPredicted RBP18.47■□□□□ 0.55
NELFA-215ENST00000488452 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
NELFA-215ENST00000488452 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
NELFA-215ENST00000488452 FEZ1Q99689 392 aa18.47■□□□□ 0.55
NELFA-215ENST00000488452 CWC22Q9HCG8 908 aaKnown RBP18.47■□□□□ 0.55
NELFA-215ENST00000488452 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
NELFA-215ENST00000488452 RABGAP1Q9Y3P9 1069 aa18.47■□□□□ 0.55
NELFA-215ENST00000488452 ALPK3Q96L96 1907 aa18.47■□□□□ 0.55
NELFA-215ENST00000488452 SOX1O00570 391 aaPredicted RBP18.46■□□□□ 0.55
NELFA-215ENST00000488452 CCNA1P78396 465 aa18.46■□□□□ 0.55
NELFA-215ENST00000488452 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
NELFA-215ENST00000488452 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
NELFA-215ENST00000488452 ABCB5Q2M3G0 1257 aa18.46■□□□□ 0.55
NELFA-215ENST00000488452 CATSPERGQ6ZRH7 1159 aa18.46■□□□□ 0.55
NELFA-215ENST00000488452 AACSQ86V21 672 aa18.46■□□□□ 0.55
NELFA-215ENST00000488452 CABP5Q9NP86 173 aa18.46■□□□□ 0.55
NELFA-215ENST00000488452 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
NELFA-215ENST00000488452 MYH1P12882 1939 aa18.46■□□□□ 0.55
NELFA-215ENST00000488452 CNMDO75829 334 aa18.45■□□□□ 0.54
NELFA-215ENST00000488452 GLRX3O76003 335 aaKnown RBP18.45■□□□□ 0.54
NELFA-215ENST00000488452 CCL14Q16627 93 aa18.45■□□□□ 0.54
NELFA-215ENST00000488452 EDC3Q96F86 508 aaKnown RBP18.45■□□□□ 0.54
NELFA-215ENST00000488452 APBA2Q99767 749 aa18.45■□□□□ 0.54
NELFA-215ENST00000488452 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
NELFA-215ENST00000488452 DDX60LQ5H9U9 1706 aaKnown RBP18.44■□□□□ 0.54
NELFA-215ENST00000488452 CCND3P30281 292 aaPredicted RBP18.44■□□□□ 0.54
NELFA-215ENST00000488452 PLCD1P51178 756 aa18.44■□□□□ 0.54
NELFA-215ENST00000488452 MAP2K5Q13163 448 aa18.44■□□□□ 0.54
NELFA-215ENST00000488452 HSP90AB4PQ58FF6 505 aa18.44■□□□□ 0.54
NELFA-215ENST00000488452 LHX8Q68G74 356 aa18.44■□□□□ 0.54
NELFA-215ENST00000488452 ACER1Q8TDN7 264 aa18.44■□□□□ 0.54
NELFA-215ENST00000488452 LRCH3Q96II8 777 aa18.44■□□□□ 0.54
NELFA-215ENST00000488452 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
NELFA-215ENST00000488452 MAGEB6P1A0A0J9YX57 407 aa18.43■□□□□ 0.54
NELFA-215ENST00000488452 POLR3DP05423 398 aaPredicted RBP18.43■□□□□ 0.54
NELFA-215ENST00000488452 SYN1P17600 705 aa18.43■□□□□ 0.54
NELFA-215ENST00000488452 VCAM1P19320 739 aa18.43■□□□□ 0.54
NELFA-215ENST00000488452 SHMT1P34896 483 aa18.43■□□□□ 0.54
NELFA-215ENST00000488452 TTF1Q15361 905 aaPredicted RBP18.43■□□□□ 0.54
NELFA-215ENST00000488452 LBX2Q6XYB7 198 aa18.43■□□□□ 0.54
NELFA-215ENST00000488452 PFASO15067 1338 aa18.43■□□□□ 0.54
NELFA-215ENST00000488452 SLC15A5A6NIM6 579 aa18.42■□□□□ 0.54
NELFA-215ENST00000488452 COL6A1P12109 1028 aa18.42■□□□□ 0.54
NELFA-215ENST00000488452 PTPREP23469 700 aa18.42■□□□□ 0.54
NELFA-215ENST00000488452 WDR78Q5VTH9 848 aa18.42■□□□□ 0.54
NELFA-215ENST00000488452 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
NELFA-215ENST00000488452 IL1RAPL2Q9NP60 686 aa18.42■□□□□ 0.54
NELFA-215ENST00000488452 GUCY1A2P33402 732 aa18.41■□□□□ 0.54
NELFA-215ENST00000488452 MAGEA10P43363 369 aaPredicted RBP18.41■□□□□ 0.54
NELFA-215ENST00000488452 GABPAQ06546 454 aa18.41■□□□□ 0.54
NELFA-215ENST00000488452 SLC9C2Q5TAH2 1124 aa18.41■□□□□ 0.54
NELFA-215ENST00000488452 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
NELFA-215ENST00000488452 PANK1Q8TE04 598 aa18.41■□□□□ 0.54
NELFA-215ENST00000488452 CRNKL1Q9BZJ0 848 aaKnown RBP18.41■□□□□ 0.54
NELFA-215ENST00000488452 BTBD7Q9P203 1132 aa18.41■□□□□ 0.54
NELFA-215ENST00000488452 PDE6AP16499 860 aa18.4■□□□□ 0.54
NELFA-215ENST00000488452 SEPT2Q15019 361 aa18.4■□□□□ 0.54
NELFA-215ENST00000488452 GPR153Q6NV75 609 aa18.4■□□□□ 0.54
NELFA-215ENST00000488452 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
NELFA-215ENST00000488452 MCM9Q9NXL9 1143 aa18.4■□□□□ 0.54
NELFA-215ENST00000488452 FLRT1Q9NZU1 646 aa18.4■□□□□ 0.54
NELFA-215ENST00000488452 IVNS1ABPQ9Y6Y0 642 aa18.4■□□□□ 0.54
NELFA-215ENST00000488452 SPDYE16A6NNV3 312 aaPredicted RBP18.39■□□□□ 0.53
NELFA-215ENST00000488452 HOXC6P09630 235 aa18.39■□□□□ 0.53
NELFA-215ENST00000488452 ATP2B2Q01814 1243 aa18.39■□□□□ 0.53
NELFA-215ENST00000488452 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
NELFA-215ENST00000488452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
NELFA-215ENST00000488452 HOXC10Q9NYD6 342 aa18.39■□□□□ 0.53
NELFA-215ENST00000488452 MPHOSPH10O00566 681 aaKnown RBP18.38■□□□□ 0.53
NELFA-215ENST00000488452 GRB14Q14449 540 aa18.38■□□□□ 0.53
NELFA-215ENST00000488452 COG2Q14746 738 aa18.38■□□□□ 0.53
NELFA-215ENST00000488452 LRRC26Q2I0M4 334 aa18.38■□□□□ 0.53
NELFA-215ENST00000488452 LRIT3Q3SXY7 679 aa18.38■□□□□ 0.53
NELFA-215ENST00000488452 RPAP2Q8IXW5 612 aaPredicted RBP18.38■□□□□ 0.53
NELFA-215ENST00000488452 TDHQ8IZJ6 230 aa18.38■□□□□ 0.53
NELFA-215ENST00000488452 KIF1BPQ96EK5 621 aa18.38■□□□□ 0.53
NELFA-215ENST00000488452 UBE2OQ9C0C9 1292 aaKnown RBP18.38■□□□□ 0.53
NELFA-215ENST00000488452 ZNF532Q9HCE3 1301 aa18.38■□□□□ 0.53
NELFA-215ENST00000488452 A0A1W2PRG0 241 aa18.37■□□□□ 0.53
NELFA-215ENST00000488452 GOLIM4O00461 696 aa18.37■□□□□ 0.53
NELFA-215ENST00000488452 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
NELFA-215ENST00000488452 MS4A1P11836 297 aa18.37■□□□□ 0.53
NELFA-215ENST00000488452 SLC17A8Q8NDX2 589 aa18.37■□□□□ 0.53
NELFA-215ENST00000488452 NPLOC4Q8TAT6 608 aa18.37■□□□□ 0.53
NELFA-215ENST00000488452 DNAJC2Q99543 621 aaKnown RBP18.37■□□□□ 0.53
NELFA-215ENST00000488452 DCP1AQ9NPI6 582 aaPredicted RBP18.37■□□□□ 0.53
NELFA-215ENST00000488452 TCRBV5S4A2TA0A5A2 114 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 APBB1O00213 710 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 STRNO43815 780 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 MSCO60682 206 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 CNGA1P29973 690 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 EVX2Q03828 476 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 MIER1Q8N108 512 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
NELFA-215ENST00000488452 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
NELFA-215ENST00000488452 DDX20Q9UHI6 824 aaKnown RBP18.36■□□□□ 0.53
NELFA-215ENST00000488452 HMMRO75330 724 aa18.35■□□□□ 0.53
NELFA-215ENST00000488452 CYP2C19P33261 490 aa18.35■□□□□ 0.53
NELFA-215ENST00000488452 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
NELFA-215ENST00000488452 DPP9Q86TI2 863 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms