RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 TEX11Q8IYF3 940 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 FAM177A1Q8N128 213 aaPredicted RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 CELF1Q92879 486 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 AIFM3Q96NN9 605 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 RAB34Q9BZG1 259 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 NBPF3Q9H094 633 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 TCP11L1Q9NUJ3 509 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 SERTAD1Q9UHV2 236 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 TRPC5Q9UL62 973 aaPredicted RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PYCARDQ9ULZ3 195 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 LAMB2P55268 1798 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 DDX60Q8IY21 1712 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 SLIT2O94813 1529 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 SYNRGQ9UMZ2 1314 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 hCG_1984214I3L0E3 225 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 LAD1O00515 517 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PES1O00541 588 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 MCM7P33993 719 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PPP1R2P41236 205 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 TFAP4Q01664 338 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 ZNF174Q15697 407 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 DPCR1Q3MIW9 517 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 FAM47AQ5JRC9 791 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 RRAGBQ5VZM2 374 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PIK3AP1Q6ZUJ8 805 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 ILDR1Q86SU0 546 aaPredicted RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 NRAPQ86VF7 1730 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 FAM114A1Q8IWE2 563 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 ZNF713Q8N859 430 aaPredicted RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 ENAHQ8N8S7 591 aaPredicted RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 NSUN4Q96CB9 384 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 CLIC6Q96NY7 704 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 EYA3Q99504 573 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 NAP1L4Q99733 375 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 XPO4Q9C0E2 1151 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 DUOX1Q9NRD9 1551 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 NUP98P52948 1817 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 FOXP2O15409 715 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 BBOX1O75936 387 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 IPO7O95373 1038 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PTPREP23469 700 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 LONP1P36776 959 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 AFMP43652 599 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 NAPAP54920 295 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 SLC27A3Q5K4L6 730 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 DTHD1Q6ZMT9 781 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 KRT25Q7Z3Z0 450 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 FCHSD1Q86WN1 690 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 DGKHQ86XP1 1220 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 BLIDQ8IZY5 108 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 TGFBRAP1Q8WUH2 860 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 ARHGEF1Q92888 912 aaKnown RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 CALML4Q96GE6 196 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PCMTD1Q96MG8 357 aaPredicted RBP3.01□□□□□ -1.93
C9orf72-205ENST00000488117 MAP3K14Q99558 947 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PHF20Q9BVI0 1012 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 CSRNP2Q9H175 543 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 INCENPQ9NQS7 918 aa3.01□□□□□ -1.93
C9orf72-205ENST00000488117 PSDA5PKW4 1024 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 VWA3AA6NCI4 1184 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 WDHD1O75717 1129 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 FGFR1OPO95684 399 aaKnown RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 ERCC5P28715 1186 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 CASQ1P31415 396 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 UBA7P41226 1012 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 BTDP43251 543 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 COL9A3Q14050 684 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 TRIM14Q14142 442 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 SYCP1Q15431 976 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 NTRK3Q16288 839 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 AXDND1Q5T1B0 1012 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 SHC4Q6S5L8 630 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 CMTR1Q8N1G2 835 aaKnown RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 C17orf53Q8N3J3 647 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 PNMA1Q8ND90 353 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 NOC3LQ8WTT2 800 aaKnown RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 RIOK1Q9BRS2 568 aaKnown RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 MAGEF1Q9HAY2 307 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 DCP1AQ9NPI6 582 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 TRMT1Q9NXH9 659 aaKnown RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 SAP30BPQ9UHR5 308 aaKnown RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 TUBE1Q9UJT0 475 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 MAN1B1Q9UKM7 699 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 PCDHA4Q9UN74 947 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 STX8Q9UNK0 236 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 MYH7P12883 1935 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 MROH7-TTC4A0A0A0MT08 1334 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 CICQ96RK0 1608 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 SNAP23O00161 211 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 GRM4Q14833 912 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 PTPAQ15257 358 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 PFKFB3Q16875 520 aaPredicted RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 SLC4A8Q2Y0W8 1093 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 SPECC1Q5M775 1068 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 ARL6IP4Q66PJ3 421 aaKnown RBP3□□□□□ -1.93
C9orf72-205ENST00000488117 WWC2Q6AWC2 1192 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 KLHL10Q6JEL2 608 aa3□□□□□ -1.93
C9orf72-205ENST00000488117 FAM196AQ6ZSG2 479 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms