RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 C1QTNF9P0C862 333 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 IGBP1P78318 339 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 TTLL4Q14679 1199 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 KIF4BQ2VIQ3 1234 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 DBX2Q6ZNG2 339 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 PCOLCE2Q9UKZ9 415 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 PPM1HQ9ULR3 514 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 USP31Q70CQ4 1352 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 USP17L7P0C7H9 530 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 HOXA5P20719 270 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 NME2P22392 152 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 EIF4BP23588 611 aaKnown RBP5.05□□□□□ -1.6
HFM1-208ENST00000488023 ARNTP27540 789 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 SULF2Q8IWU5 870 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.05□□□□□ -1.63e-12■■■■□ 19.7
HFM1-208ENST00000488023 CEP44Q9C0F1 390 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 TNKS2Q9H2K2 1166 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 PRDM7Q9NQW5 492 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 SAMM50Q9Y512 469 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 SNX11Q9Y5W9 270 aa5.05□□□□□ -1.6
HFM1-208ENST00000488023 HCLS1P14317 486 aaPredicted RBP5.04□□□□□ -1.6
HFM1-208ENST00000488023 ITIH2P19823 946 aa5.04□□□□□ -1.6
HFM1-208ENST00000488023 KCNMB1Q16558 191 aa5.04□□□□□ -1.6
HFM1-208ENST00000488023 SOGA3Q5TF21 947 aa5.04□□□□□ -1.6
HFM1-208ENST00000488023 PDZD3Q86UT5 571 aa5.04□□□□□ -1.6
HFM1-208ENST00000488023 LIN37Q96GY3 246 aaPredicted RBP5.04□□□□□ -1.6
HFM1-208ENST00000488023 GGT7Q9UJ14 662 aa5.04□□□□□ -1.6
HFM1-208ENST00000488023 NEFMP07197 916 aa5.03□□□□□ -1.6
HFM1-208ENST00000488023 ATF4P18848 351 aaPredicted RBP5.03□□□□□ -1.6
HFM1-208ENST00000488023 MEI1Q5TIA1 1274 aa5.03□□□□□ -1.6
HFM1-208ENST00000488023 HS2ST1Q7LGA3 356 aa5.03□□□□□ -1.6
HFM1-208ENST00000488023 VPS37DQ86XT2 251 aa5.03□□□□□ -1.6
HFM1-208ENST00000488023 TOP6BLQ8N6T0 577 aa5.03□□□□□ -1.6
HFM1-208ENST00000488023 RELTQ969Z4 430 aa5.03□□□□□ -1.6
HFM1-208ENST00000488023 HEXIM2Q96MH2 286 aaKnown RBP5.03□□□□□ -1.6
HFM1-208ENST00000488023 NECAB3Q96P71 396 aaPredicted RBP5.03□□□□□ -1.6
HFM1-208ENST00000488023 SLC52A1Q9NWF4 448 aa5.03□□□□□ -1.6
HFM1-208ENST00000488023 HSD3B2P26439 372 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 ST13P50502 369 aaKnown RBP5.02□□□□□ -1.61
HFM1-208ENST00000488023 PAK2Q13177 524 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 FAM214BQ7L5A3 538 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 CTNND2Q9UQB3 1225 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 SUGT1Q9Y2Z0 365 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 PARNO95453 639 aaKnown RBP5.02□□□□□ -1.61
HFM1-208ENST00000488023 IBSPP21815 317 aaPredicted RBP5.02□□□□□ -1.61
HFM1-208ENST00000488023 GJA8P48165 433 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 ANAPC15P60006 121 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 ZP2Q05996 745 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 ZNF252P-AS1Q0IIN9 211 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 SCARA3Q6AZY7 606 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 STK35Q8TDR2 534 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 ASB11Q8WXH4 323 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 ISL2Q96A47 359 aa5.02□□□□□ -1.61
HFM1-208ENST00000488023 NOP58Q9Y2X3 529 aaKnown RBP5.02□□□□□ -1.61
HFM1-208ENST00000488023 IKZF1Q13422 519 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 LRRC14Q15048 493 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 TAF1CQ15572 869 aaPredicted RBP5.01□□□□□ -1.61
HFM1-208ENST00000488023 FYB2Q5VWT5 728 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 TPTE2Q6XPS3 522 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 PRR23BQ6ZRT6 265 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.01□□□□□ -1.619e-7■■■■■ 34
HFM1-208ENST00000488023 FAM9AQ8IZU1 332 aaPredicted RBP5.01□□□□□ -1.61
HFM1-208ENST00000488023 MRFAP1L1Q96HT8 127 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 CBX8Q9HC52 389 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 METTL14Q9HCE5 456 aaKnown RBP5.01□□□□□ -1.61
HFM1-208ENST00000488023 SSU72Q9NP77 194 aaKnown RBP5.01□□□□□ -1.61
HFM1-208ENST00000488023 COPRSQ9NQ92 184 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 IFT57Q9NWB7 429 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 CACNA2D2Q9NY47 1150 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 COL4A3BPQ9Y5P4 624 aa5.01□□□□□ -1.61
HFM1-208ENST00000488023 NPIPB6E9PJ23 425 aa5□□□□□ -1.61
HFM1-208ENST00000488023 ENC1O14682 589 aa5□□□□□ -1.61
HFM1-208ENST00000488023 TRIM37O94972 964 aa5□□□□□ -1.61
HFM1-208ENST00000488023 BMP6P22004 513 aa5□□□□□ -1.61
HFM1-208ENST00000488023 AFMP43652 599 aa5□□□□□ -1.61
HFM1-208ENST00000488023 ERVK-24P63145 666 aa5□□□□□ -1.61
HFM1-208ENST00000488023 SERINC3Q13530 473 aa5□□□□□ -1.61
HFM1-208ENST00000488023 NFE2L2Q16236 605 aa5□□□□□ -1.61
HFM1-208ENST00000488023 RNF187Q5TA31 235 aaPredicted RBP5□□□□□ -1.61
HFM1-208ENST00000488023 MAP1SQ66K74 1059 aaPredicted RBP5□□□□□ -1.61
HFM1-208ENST00000488023 FILIP1Q7Z7B0 1213 aa5□□□□□ -1.61
HFM1-208ENST00000488023 GPBAR1Q8TDU6 330 aa5□□□□□ -1.61
HFM1-208ENST00000488023 GPRASP2Q96D09 838 aa5□□□□□ -1.61
HFM1-208ENST00000488023 IGF2BP3O00425 579 aaKnown RBP eCLIP4.99□□□□□ -1.61
HFM1-208ENST00000488023 NFIBO00712 420 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 PSPNO60542 156 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 ZC3H12AQ5D1E8 599 aaKnown RBP4.99□□□□□ -1.61
HFM1-208ENST00000488023 ERMP1Q7Z2K6 904 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 SPACA3Q8IXA5 215 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 CKAP2LQ8IYA6 745 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 RNF214Q8ND24 703 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 ACSBG1Q96GR2 724 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 PCDH12Q9NPG4 1184 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 GTF2IRD1Q9UHL9 959 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 CYP8B1Q9UNU6 501 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 PAGE1O75459 146 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 CLSTN1O94985 981 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 GLI1P08151 1106 aa4.99□□□□□ -1.61
HFM1-208ENST00000488023 RASIP1Q5U651 963 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms