RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PICALMQ13492 652 aa23.56■■□□□ 1.36
PHF1-209ENST00000487667 SLC4A8Q2Y0W8 1093 aa23.56■■□□□ 1.36
PHF1-209ENST00000487667 OTUD7BQ6GQQ9 843 aa23.56■■□□□ 1.36
PHF1-209ENST00000487667 USP28Q96RU2 1077 aa23.56■■□□□ 1.36
PHF1-209ENST00000487667 FOXP1Q9H334 677 aaPredicted RBP23.56■■□□□ 1.36
PHF1-209ENST00000487667 SERPINB13Q9UIV8 391 aa23.56■■□□□ 1.36
PHF1-209ENST00000487667 ZNF646O15015 1829 aaPredicted RBP23.55■■□□□ 1.36
PHF1-209ENST00000487667 PSME4Q14997 1843 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 NMT2O60551 498 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 MMP1P03956 469 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 GABPAQ06546 454 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 ECM29Q5VYK3 1845 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 SCN9AQ15858 1988 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 FUT2Q10981 343 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 FAM177A1Q8N128 213 aaPredicted RBP23.55■■□□□ 1.36
PHF1-209ENST00000487667 LARGE2Q8N3Y3 721 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 KCNQ5Q9NR82 932 aa23.55■■□□□ 1.36
PHF1-209ENST00000487667 DDX19AQ9NUU7 478 aaKnown RBP23.55■■□□□ 1.36
PHF1-209ENST00000487667 XRCC6P12956 609 aaKnown RBP eCLIP23.54■■□□□ 1.36
PHF1-209ENST00000487667 NASPP49321 788 aaPredicted RBP23.54■■□□□ 1.36
PHF1-209ENST00000487667 RBM5P52756 815 aaKnown RBP eCLIP23.54■■□□□ 1.36
PHF1-209ENST00000487667 HDAC9Q9UKV0 1011 aa23.54■■□□□ 1.36
PHF1-209ENST00000487667 NOVP48745 357 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 GRM4Q14833 912 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 DALRD3Q5D0E6 543 aaKnown RBP23.53■■□□□ 1.36
PHF1-209ENST00000487667 SLC44A5Q8NCS7 719 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 BICD2Q8TD16 824 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 AIFM3Q96NN9 605 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 BRMS1Q9HCU9 246 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 SYCE3A1L190 88 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 TOP1P11387 765 aaKnown RBP23.53■■□□□ 1.36
PHF1-209ENST00000487667 MMP14P50281 582 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 STK38Q15208 465 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 CCDC17Q96LX7 622 aa23.53■■□□□ 1.36
PHF1-209ENST00000487667 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.53■■□□□ 1.36
PHF1-209ENST00000487667 SF3A1Q15459 793 aaKnown RBP23.52■■□□□ 1.36
PHF1-209ENST00000487667 RSBN1LQ6PCB5 846 aaPredicted RBP23.52■■□□□ 1.36
PHF1-209ENST00000487667 DDX4Q9NQI0 724 aaKnown RBP23.52■■□□□ 1.36
PHF1-209ENST00000487667 STX8Q9UNK0 236 aa23.52■■□□□ 1.36
PHF1-209ENST00000487667 MYH6P13533 1939 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 VIL1P09327 827 aaKnown RBP23.51■■□□□ 1.35
PHF1-209ENST00000487667 ANO1Q5XXA6 986 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 NOSTRINQ8IVI9 506 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 CCDC82Q8N4S0 544 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 V9GY48 417 aaPredicted RBP23.51■■□□□ 1.35
PHF1-209ENST00000487667 CNTNAP5Q8WYK1 1306 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 COL2A1P02458 1487 aaPredicted RBP23.51■■□□□ 1.35
PHF1-209ENST00000487667 YDJCA8MPS7 323 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 KIF28PB7ZC32 967 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 ENTPD3O75355 529 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 SMARCA1P28370 1054 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 GAS2L3Q86XJ1 694 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 NIM1KQ8IY84 436 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 LINC00301Q8NCQ3 95 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 TMEM47Q9BQJ4 181 aa23.51■■□□□ 1.35
PHF1-209ENST00000487667 A0A1W2PQ27 194 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 A0A1W2PQ64 194 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 A0A1W2PQD8 194 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 PLEKHA8P1O95397 391 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 GUCY1A2P33402 732 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 ME1P48163 572 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 ADALQ6DHV7 355 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 DIS3L2Q8IYB7 885 aaKnown RBP23.5■■□□□ 1.35
PHF1-209ENST00000487667 PGBD1Q96JS3 809 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 GJB4Q9NTQ9 266 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 PI4KBQ9UBF8 816 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 ZNRF3Q9ULT6 936 aa23.5■■□□□ 1.35
PHF1-209ENST00000487667 CEBPZQ03701 1054 aaKnown RBP23.49■■□□□ 1.35
PHF1-209ENST00000487667 RILPL1Q5EBL4 403 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 OGFOD1Q8N543 542 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 NLGN2Q8NFZ4 835 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 SH3GLB2Q9NR46 395 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 TMOD2Q9NZR1 351 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 SPTLC2O15270 562 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 PKN1Q16512 942 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 CCDC73Q6ZRK6 1079 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 FOXP4Q8IVH2 680 aaPredicted RBP23.49■■□□□ 1.35
PHF1-209ENST00000487667 CMTR1Q8N1G2 835 aaKnown RBP23.49■■□□□ 1.35
PHF1-209ENST00000487667 SRBD1Q8N5C6 995 aaKnown RBP23.49■■□□□ 1.35
PHF1-209ENST00000487667 AGBL3Q8NEM8 1001 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 NUP62CLQ9H1M0 184 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 TSPY26PQ9H489 355 aa23.49■■□□□ 1.35
PHF1-209ENST00000487667 SCG2P13521 617 aa23.48■■□□□ 1.35
PHF1-209ENST00000487667 PFKFB3Q16875 520 aaPredicted RBP23.48■■□□□ 1.35
PHF1-209ENST00000487667 CFAP100Q494V2 611 aa23.48■■□□□ 1.35
PHF1-209ENST00000487667 BCS1LQ9Y276 419 aa23.48■■□□□ 1.35
PHF1-209ENST00000487667 PPP6R2O75170 966 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 SLC39A14Q15043 492 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 ANP32BQ92688 251 aaKnown RBP23.47■■□□□ 1.35
PHF1-209ENST00000487667 PHF20Q9BVI0 1012 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 ZNF277Q9NRM2 450 aaPredicted RBP23.47■■□□□ 1.35
PHF1-209ENST00000487667 PALM3A6NDB9 673 aaPredicted RBP23.47■■□□□ 1.35
PHF1-209ENST00000487667 CALML3P27482 149 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 KRT2P35908 639 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 CEP95Q96GE4 821 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 TRIM34Q9BYJ4 488 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 TAOK3Q9H2K8 898 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 MTMR4Q9NYA4 1195 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms