RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 USP17L11C9JVI0 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L18D6R9N7 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L22D6RA61 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L17D6RBQ6 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L19D6RCP7 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L20D6RJB6 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 PEX10O60683 326 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 CYP2D6P10635 497 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 EVX2Q03828 476 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L24Q0WX57 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 UBE3CQ15386 1083 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 ACER1Q8TDN7 264 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 ATP8A2Q9NTI2 1148 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 MYH7P12883 1935 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 PRKAB2O43741 272 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 ERVK-9P63128 1117 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 ERVK-24P63145 666 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 SEPT2Q15019 361 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 DCTPP1Q9H773 170 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 CWC22Q9HCG8 908 aaKnown RBP28.43■■■□□ 2.14
PLOD3-215ENST00000487563 RBPJLQ9UBG7 517 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 SWAP70Q9UH65 585 aa28.43■■■□□ 2.14
PLOD3-215ENST00000487563 HMGCRP04035 888 aa28.42■■■□□ 2.14
PLOD3-215ENST00000487563 VCAM1P19320 739 aa28.42■■■□□ 2.14
PLOD3-215ENST00000487563 MAPK4P31152 587 aa28.42■■■□□ 2.14
PLOD3-215ENST00000487563 SOCS4Q8WXH5 440 aa28.42■■■□□ 2.14
PLOD3-215ENST00000487563 DEFB118Q96PH6 123 aa28.42■■■□□ 2.14
PLOD3-215ENST00000487563 GJD2Q9UKL4 321 aa28.42■■■□□ 2.14
PLOD3-215ENST00000487563 FARP2O94887 1054 aaPredicted RBP28.41■■■□□ 2.14
PLOD3-215ENST00000487563 SGPL1O95470 568 aa28.41■■■□□ 2.14
PLOD3-215ENST00000487563 SLC44A5Q8NCS7 719 aa28.41■■■□□ 2.14
PLOD3-215ENST00000487563 NUDT12Q9BQG2 462 aa28.41■■■□□ 2.14
PLOD3-215ENST00000487563 TFRCP02786 760 aaKnown RBP28.4■■■□□ 2.14
PLOD3-215ENST00000487563 GUCY1A2P33402 732 aa28.4■■■□□ 2.14
PLOD3-215ENST00000487563 DYNLL2Q96FJ2 89 aa28.4■■■□□ 2.14
PLOD3-215ENST00000487563 SLC4A4Q9Y6R1 1079 aa28.4■■■□□ 2.14
PLOD3-215ENST00000487563 CHGBP05060 677 aa28.39■■■□□ 2.14
PLOD3-215ENST00000487563 CYP2B6P20813 491 aa28.39■■■□□ 2.14
PLOD3-215ENST00000487563 CATSPERGQ6ZRH7 1159 aa28.39■■■□□ 2.14
PLOD3-215ENST00000487563 TMEM179Q6ZVK1 233 aa28.39■■■□□ 2.14
PLOD3-215ENST00000487563 DPF3Q92784 378 aa28.39■■■□□ 2.14
PLOD3-215ENST00000487563 HTATIP2Q9BUP3 242 aa28.39■■■□□ 2.14
PLOD3-215ENST00000487563 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.39■■■□□ 2.14
PLOD3-215ENST00000487563 RPAP3Q9H6T3 665 aaPredicted RBP28.39■■■□□ 2.14
PLOD3-215ENST00000487563 RABGAP1Q9Y3P9 1069 aa28.39■■■□□ 2.14
PLOD3-215ENST00000487563 MYH8P13535 1937 aa28.38■■■□□ 2.13
PLOD3-215ENST00000487563 BAZ2AQ9UIF9 1905 aaKnown RBP28.38■■■□□ 2.13
PLOD3-215ENST00000487563 CCNA1P78396 465 aa28.38■■■□□ 2.13
PLOD3-215ENST00000487563 PORCNQ9H237 461 aa28.38■■■□□ 2.13
PLOD3-215ENST00000487563 PAK6Q9NQU5 681 aaPredicted RBP28.38■■■□□ 2.13
PLOD3-215ENST00000487563 CAPN2P17655 700 aa28.37■■■□□ 2.13
PLOD3-215ENST00000487563 Q3C1V9 767 aa28.37■■■□□ 2.13
PLOD3-215ENST00000487563 CYP2D7A0A087X1C5 515 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 USP17L12C9JPN9 530 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 USP17L21D6R901 530 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 C12orf60Q5U649 245 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 WDR78Q5VTH9 848 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 TSHZ3Q63HK5 1081 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 GPR142Q7Z601 462 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 PLEKHH3Q7Z736 793 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 TRIB2Q92519 343 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 PUS7LQ9H0K6 701 aaKnown RBP28.36■■■□□ 2.13
PLOD3-215ENST00000487563 HMX1Q9NP08 348 aaPredicted RBP28.36■■■□□ 2.13
PLOD3-215ENST00000487563 PLXNB2O15031 1838 aa28.36■■■□□ 2.13
PLOD3-215ENST00000487563 RRP1P56182 461 aaKnown RBP28.35■■■□□ 2.13
PLOD3-215ENST00000487563 UBE2Q1Q7Z7E8 422 aa28.35■■■□□ 2.13
PLOD3-215ENST00000487563 KBTBD3Q8NAB2 608 aa28.35■■■□□ 2.13
PLOD3-215ENST00000487563 TANGO6Q9C0B7 1094 aa28.35■■■□□ 2.13
PLOD3-215ENST00000487563 ARHGEF10LQ9HCE6 1279 aa28.35■■■□□ 2.13
PLOD3-215ENST00000487563 A0A1W2PRG0 241 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 GLRX3O76003 335 aaKnown RBP28.34■■■□□ 2.13
PLOD3-215ENST00000487563 AKR1B1P15121 316 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 ZKSCAN1P17029 563 aaPredicted RBP28.34■■■□□ 2.13
PLOD3-215ENST00000487563 RGS2P41220 211 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 ICA1Q05084 483 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 TRIM32Q13049 653 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 POTEEQ6S8J3 1075 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 TRMT44Q8IYL2 757 aaKnown RBP28.34■■■□□ 2.13
PLOD3-215ENST00000487563 CCDC17Q96LX7 622 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 SH2D4AQ9H788 454 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 RPTORQ8N122 1335 aa28.34■■■□□ 2.13
PLOD3-215ENST00000487563 H0YGN5 161 aa28.33■■■□□ 2.13
PLOD3-215ENST00000487563 CNMDO75829 334 aa28.33■■■□□ 2.13
PLOD3-215ENST00000487563 XRCC5P13010 732 aaKnown RBP28.33■■■□□ 2.13
PLOD3-215ENST00000487563 CDK8P49336 464 aa28.33■■■□□ 2.13
PLOD3-215ENST00000487563 ARPP21Q9UBL0 812 aaPredicted RBP28.33■■■□□ 2.13
PLOD3-215ENST00000487563 PCDHB15Q9Y5E8 787 aa28.33■■■□□ 2.13
PLOD3-215ENST00000487563 SPDYE16A6NNV3 312 aaPredicted RBP28.32■■■□□ 2.12
PLOD3-215ENST00000487563 HABP4Q5JVS0 413 aaKnown RBP28.32■■■□□ 2.12
PLOD3-215ENST00000487563 LBX2Q6XYB7 198 aa28.32■■■□□ 2.12
PLOD3-215ENST00000487563 C16orf86Q6ZW13 317 aa28.32■■■□□ 2.12
PLOD3-215ENST00000487563 CLEC10AQ8IUN9 316 aa28.32■■■□□ 2.12
PLOD3-215ENST00000487563 CRISPLD2Q9H0B8 497 aa28.32■■■□□ 2.12
PLOD3-215ENST00000487563 PRKAR2AP13861 404 aaKnown RBP28.31■■■□□ 2.12
PLOD3-215ENST00000487563 CTR9Q6PD62 1173 aa28.31■■■□□ 2.12
PLOD3-215ENST00000487563 APPBP2Q92624 585 aa28.31■■■□□ 2.12
PLOD3-215ENST00000487563 APBA2Q99767 749 aa28.31■■■□□ 2.12
PLOD3-215ENST00000487563 IVNS1ABPQ9Y6Y0 642 aa28.31■■■□□ 2.12
PLOD3-215ENST00000487563 SMIM22K7EJ46 135 aa28.3■■■□□ 2.12
PLOD3-215ENST00000487563 ZFYP08048 801 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms