RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RABGAP1Q9Y3P9 1069 aa18.85■□□□□ 0.61
MCF2L-228ENST00000487354 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
MCF2L-228ENST00000487354 GNAI2P04899 355 aa18.84■□□□□ 0.61
MCF2L-228ENST00000487354 HOXC6P09630 235 aa18.84■□□□□ 0.61
MCF2L-228ENST00000487354 ZAP70P43403 619 aa18.84■□□□□ 0.61
MCF2L-228ENST00000487354 POLA2Q14181 598 aa18.84■□□□□ 0.61
MCF2L-228ENST00000487354 GRB14Q14449 540 aa18.84■□□□□ 0.61
MCF2L-228ENST00000487354 LBX2Q6XYB7 198 aa18.84■□□□□ 0.61
MCF2L-228ENST00000487354 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.84■□□□□ 0.61
MCF2L-228ENST00000487354 DDX20Q9UHI6 824 aaKnown RBP18.84■□□□□ 0.61
MCF2L-228ENST00000487354 VCAM1P19320 739 aa18.83■□□□□ 0.6
MCF2L-228ENST00000487354 PTPREP23469 700 aa18.83■□□□□ 0.6
MCF2L-228ENST00000487354 G3BP1Q13283 466 aaKnown RBP eCLIP18.83■□□□□ 0.6
MCF2L-228ENST00000487354 ZYXQ15942 572 aaKnown RBP18.83■□□□□ 0.6
MCF2L-228ENST00000487354 TTC39AQ5SRH9 613 aa18.83■□□□□ 0.6
MCF2L-228ENST00000487354 CATSPERGQ6ZRH7 1159 aa18.83■□□□□ 0.6
MCF2L-228ENST00000487354 ACER1Q8TDN7 264 aa18.83■□□□□ 0.6
MCF2L-228ENST00000487354 EDC3Q96F86 508 aaKnown RBP18.83■□□□□ 0.6
MCF2L-228ENST00000487354 ZNF512BQ96KM6 892 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-228ENST00000487354 SENP6Q9GZR1 1112 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-228ENST00000487354 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.6
MCF2L-228ENST00000487354 ZNFX1Q9P2E3 1918 aaKnown RBP18.82■□□□□ 0.6
MCF2L-228ENST00000487354 SLC15A5A6NIM6 579 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 SPDYE16A6NNV3 312 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 CYBAP13498 195 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 LPAR1Q92633 364 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 FAM161BQ96MY7 647 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 DBNLQ9UJU6 430 aaKnown RBP18.82■□□□□ 0.6
MCF2L-228ENST00000487354 MYH8P13535 1937 aa18.82■□□□□ 0.6
MCF2L-228ENST00000487354 COL11A1P12107 1806 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-228ENST00000487354 HLA-DOAP06340 250 aa18.81■□□□□ 0.6
MCF2L-228ENST00000487354 CYP2C19P33261 490 aa18.81■□□□□ 0.6
MCF2L-228ENST00000487354 GUCY1A2P33402 732 aa18.81■□□□□ 0.6
MCF2L-228ENST00000487354 ATN1P54259 1190 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-228ENST00000487354 CCAR1Q8IX12 1150 aaKnown RBP18.81■□□□□ 0.6
MCF2L-228ENST00000487354 TRIM34Q9BYJ4 488 aa18.81■□□□□ 0.6
MCF2L-228ENST00000487354 KIAA1683Q9H0B3 1180 aa18.81■□□□□ 0.6
MCF2L-228ENST00000487354 EHD4Q9H223 541 aa18.81■□□□□ 0.6
MCF2L-228ENST00000487354 DNM1LO00429 736 aa18.8■□□□□ 0.6
MCF2L-228ENST00000487354 SHMT1P34896 483 aa18.8■□□□□ 0.6
MCF2L-228ENST00000487354 RTP1P59025 263 aa18.8■□□□□ 0.6
MCF2L-228ENST00000487354 MFSD14CQ5VZR4 134 aa18.8■□□□□ 0.6
MCF2L-228ENST00000487354 MIGA1Q8NAN2 632 aa18.8■□□□□ 0.6
MCF2L-228ENST00000487354 SSH3Q8TE77 659 aa18.8■□□□□ 0.6
MCF2L-228ENST00000487354 SMCHD1A6NHR9 2005 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 IGSF3O75054 1194 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 CYP7A1P22680 504 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 CCNA1P78396 465 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 EVX2Q03828 476 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 CCDC158Q5M9N0 1113 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 C9orf50Q5SZB4 431 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 FEZ1Q99689 392 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 SERPINB13Q9UIV8 391 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 MUC3AQ02505 3323 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 PLXNA1Q9UIW2 1896 aa18.79■□□□□ 0.6
MCF2L-228ENST00000487354 MSCO60682 206 aa18.78■□□□□ 0.6
MCF2L-228ENST00000487354 BCAR3O75815 825 aa18.78■□□□□ 0.6
MCF2L-228ENST00000487354 SNX17Q15036 470 aa18.78■□□□□ 0.6
MCF2L-228ENST00000487354 GLRX3O76003 335 aaKnown RBP18.77■□□□□ 0.6
MCF2L-228ENST00000487354 PLCD1P51178 756 aa18.77■□□□□ 0.6
MCF2L-228ENST00000487354 USP14P54578 494 aa18.77■□□□□ 0.6
MCF2L-228ENST00000487354 RAB3GAP1Q15042 981 aa18.77■□□□□ 0.6
MCF2L-228ENST00000487354 SHHQ15465 462 aa18.77■□□□□ 0.6
MCF2L-228ENST00000487354 GJC2Q5T442 439 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-228ENST00000487354 WDR78Q5VTH9 848 aa18.77■□□□□ 0.6
MCF2L-228ENST00000487354 CLUAP1Q96AJ1 413 aa18.77■□□□□ 0.6
MCF2L-228ENST00000487354 LBHD1Q9BQE6 289 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-228ENST00000487354 RPAP3Q9H6T3 665 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-228ENST00000487354 ANTXR1Q9H6X2 564 aa18.77■□□□□ 0.6
MCF2L-228ENST00000487354 A0A1W2PRG0 241 aa18.76■□□□□ 0.59
MCF2L-228ENST00000487354 CNGA1P29973 690 aa18.76■□□□□ 0.59
MCF2L-228ENST00000487354 ATP2B2Q01814 1243 aa18.76■□□□□ 0.59
MCF2L-228ENST00000487354 GABPAQ06546 454 aa18.76■□□□□ 0.59
MCF2L-228ENST00000487354 ABCB5Q2M3G0 1257 aa18.76■□□□□ 0.59
MCF2L-228ENST00000487354 CERKLQ49MI3 558 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-228ENST00000487354 ZNF697Q5TEC3 545 aa18.76■□□□□ 0.59
MCF2L-228ENST00000487354 TMEM57Q8N5G2 664 aa18.76■□□□□ 0.59
MCF2L-228ENST00000487354 EAF2Q96CJ1 260 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-228ENST00000487354 CDX2Q99626 313 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-228ENST00000487354 RIOK1Q9BRS2 568 aaKnown RBP18.76■□□□□ 0.59
MCF2L-228ENST00000487354 MOV10L1Q9BXT6 1211 aaKnown RBP18.76■□□□□ 0.59
MCF2L-228ENST00000487354 TTYH1Q9H313 450 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-228ENST00000487354 CWC22Q9HCG8 908 aaKnown RBP18.76■□□□□ 0.59
MCF2L-228ENST00000487354 BAZ2AQ9UIF9 1905 aaKnown RBP18.75■□□□□ 0.59
MCF2L-228ENST00000487354 COBLO75128 1261 aa18.75■□□□□ 0.59
MCF2L-228ENST00000487354 KIAA1755Q5JYT7 1200 aa18.75■□□□□ 0.59
MCF2L-228ENST00000487354 OLFML2BQ68BL8 750 aa18.75■□□□□ 0.59
MCF2L-228ENST00000487354 SLC39A5Q6ZMH5 540 aa18.75■□□□□ 0.59
MCF2L-228ENST00000487354 MAGEB6Q8N7X4 407 aa18.75■□□□□ 0.59
MCF2L-228ENST00000487354 PDLIM7Q9NR12 457 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms