RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 ZSCAN16Q9H4T2 348 aaPredicted RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 FAM198AQ9UFP1 575 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 TACC3Q9Y6A5 838 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 DDX60LQ5H9U9 1706 aaKnown RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 BAZ2AQ9UIF9 1905 aaKnown RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 ZNF646O15015 1829 aaPredicted RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 COL4A5P29400 1685 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 WNT10BO00744 389 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 TBC1D12O60347 775 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 TOP1P11387 765 aaKnown RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 NOVP48745 357 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 GMPSP49915 693 aaPredicted RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 TCP10Q12799 353 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 NFIAQ12857 509 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 TRIM29Q14134 588 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 ATL3Q6DD88 541 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 DPY19L2Q6NUT2 758 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 FAM177A1Q8N128 213 aaPredicted RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 NUP133Q8WUM0 1156 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 CSRNP1Q96S65 589 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 RNF26Q9BY78 433 aaPredicted RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 NCOA5Q9HCD5 579 aaKnown RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 CABP5Q9NP86 173 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 GPHNQ9NQX3 736 aaPredicted RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 GINM1Q9NU53 330 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 ORC3Q9UBD5 711 aaPredicted RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 CNOT7Q9UIV1 285 aaKnown RBP8.38□□□□□ -1.07
CCNB3-206ENST00000487204 SYNPO2Q9UMS6 1093 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 GJA3Q9Y6H8 435 aa8.38□□□□□ -1.07
CCNB3-206ENST00000487204 VPS37CA5D8V6 355 aaPredicted RBP8.37□□□□□ -1.07
CCNB3-206ENST00000487204 DEXIO95424 95 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
CCNB3-206ENST00000487204 CTDNEP1O95476 244 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 TTLL1O95922 423 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 F13A1P00488 732 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 SMARCA1P28370 1054 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
CCNB3-206ENST00000487204 MCM4P33991 863 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 VASPP50552 380 aaPredicted RBP8.37□□□□□ -1.07
CCNB3-206ENST00000487204 TROAPQ12815 778 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
CCNB3-206ENST00000487204 SLC4A8Q2Y0W8 1093 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 CERKLQ49MI3 558 aaPredicted RBP8.37□□□□□ -1.07
CCNB3-206ENST00000487204 TATDN1Q6P1N9 297 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 TMEM179Q6ZVK1 233 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 APOBEC3FQ8IUX4 373 aaKnown RBP8.37□□□□□ -1.07
CCNB3-206ENST00000487204 MICALL2Q8IY33 904 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 PNMA1Q8ND90 353 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 C8orf76Q96K31 380 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 KANSL2Q9H9L4 492 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 VEZTQ9HBM0 779 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 IL17RBQ9NRM6 502 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 MTMR4Q9NYA4 1195 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 STX8Q9UNK0 236 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 PPP2R3BQ9Y5P8 575 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 MYH1P12882 1939 aa8.37□□□□□ -1.07
CCNB3-206ENST00000487204 ECM29Q5VYK3 1845 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 DDTLA6NHG4 134 aaPredicted RBP8.36□□□□□ -1.07
CCNB3-206ENST00000487204 TCP10L2B9ZVM9 353 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 PRPF3O43395 683 aaKnown RBP8.36□□□□□ -1.07
CCNB3-206ENST00000487204 JAK2O60674 1132 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
CCNB3-206ENST00000487204 CDC27P30260 824 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 SHMT1P34896 483 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 ADD1P35611 737 aaKnown RBP8.36□□□□□ -1.07
CCNB3-206ENST00000487204 CLCN6P51797 869 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 SAFBQ15424 915 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCNB3-206ENST00000487204 NTRK3Q16288 839 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 RBM26Q5T8P6 1007 aaKnown RBP8.36□□□□□ -1.07
CCNB3-206ENST00000487204 RCSD1Q6JBY9 416 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 SLC44A5Q8NCS7 719 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 FBXO18Q8NFZ0 1043 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCNB3-206ENST00000487204 SENP2Q9HC62 589 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 GPRC5DQ9NZD1 345 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 RNF181Q9P0P0 153 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 NYAP2Q9P242 653 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 MTMR6Q9Y217 621 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 ZDHHC9Q9Y397 364 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 CDK5RAP2Q96SN8 1893 aa8.36□□□□□ -1.07
CCNB3-206ENST00000487204 PITPNM2Q9BZ72 1349 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 IGKV6D-41A0A0C4DH26 115 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 CLRN2A0PK11 232 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 MPHOSPH10O00566 681 aaKnown RBP8.35□□□□□ -1.07
CCNB3-206ENST00000487204 NMT2O60551 498 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 PARP1P09874 1014 aaKnown RBP8.35□□□□□ -1.07
CCNB3-206ENST00000487204 NCLP19338 710 aaKnown RBP8.35□□□□□ -1.07
CCNB3-206ENST00000487204 CACNB3P54284 484 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 KRT85P78386 507 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 MAP3K10Q02779 954 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 PKP1Q13835 747 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 GRM4Q14833 912 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 GPR162Q16538 588 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 ABCB5Q2M3G0 1257 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 ASPRV1Q53RT3 343 aa8.35□□□□□ -1.07
CCNB3-206ENST00000487204 GPATCH4Q5T3I0 446 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms