RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 ZMYND8Q9ULU4 1186 aaPredicted RBP22.83■■□□□ 1.25
GMDS-205ENST00000486793 DOCK3Q8IZD9 2030 aa22.82■■□□□ 1.24
GMDS-205ENST00000486793 CNMDO75829 334 aa22.82■■□□□ 1.24
GMDS-205ENST00000486793 RGS2P41220 211 aa22.82■■□□□ 1.24
GMDS-205ENST00000486793 ABCB5Q2M3G0 1257 aa22.82■■□□□ 1.24
GMDS-205ENST00000486793 CATSPERGQ6ZRH7 1159 aa22.82■■□□□ 1.24
GMDS-205ENST00000486793 GDF15Q99988 308 aa22.82■■□□□ 1.24
GMDS-205ENST00000486793 RIOK1Q9BRS2 568 aaKnown RBP22.82■■□□□ 1.24
GMDS-205ENST00000486793 RABGAP1Q9Y3P9 1069 aa22.82■■□□□ 1.24
GMDS-205ENST00000486793 SIPA1L1O43166 1804 aa22.81■■□□□ 1.24
GMDS-205ENST00000486793 USP14P54578 494 aa22.81■■□□□ 1.24
GMDS-205ENST00000486793 LHX8Q68G74 356 aa22.81■■□□□ 1.24
GMDS-205ENST00000486793 TMED8Q6PL24 325 aaPredicted RBP22.81■■□□□ 1.24
GMDS-205ENST00000486793 PANK1Q8TE04 598 aa22.81■■□□□ 1.24
GMDS-205ENST00000486793 KIAA1683Q9H0B3 1180 aa22.81■■□□□ 1.24
GMDS-205ENST00000486793 CWC22Q9HCG8 908 aaKnown RBP22.81■■□□□ 1.24
GMDS-205ENST00000486793 IL1RAPL2Q9NP60 686 aa22.81■■□□□ 1.24
GMDS-205ENST00000486793 CABP5Q9NP86 173 aa22.81■■□□□ 1.24
GMDS-205ENST00000486793 CCND3P30281 292 aaPredicted RBP22.8■■□□□ 1.24
GMDS-205ENST00000486793 SHMT1P34896 483 aa22.8■■□□□ 1.24
GMDS-205ENST00000486793 EDC3Q96F86 508 aaKnown RBP22.8■■□□□ 1.24
GMDS-205ENST00000486793 LRCH3Q96II8 777 aa22.8■■□□□ 1.24
GMDS-205ENST00000486793 MAGEB6P1A0A0J9YX57 407 aa22.79■■□□□ 1.24
GMDS-205ENST00000486793 POLR3DP05423 398 aaPredicted RBP22.79■■□□□ 1.24
GMDS-205ENST00000486793 SYN1P17600 705 aa22.79■■□□□ 1.24
GMDS-205ENST00000486793 VCAM1P19320 739 aa22.79■■□□□ 1.24
GMDS-205ENST00000486793 BMP8BP34820 402 aa22.79■■□□□ 1.24
GMDS-205ENST00000486793 RHPN1Q8TCX5 695 aa22.79■■□□□ 1.24
GMDS-205ENST00000486793 CCNA1P78396 465 aa22.78■■□□□ 1.24
GMDS-205ENST00000486793 MAP2K5Q13163 448 aa22.78■■□□□ 1.24
GMDS-205ENST00000486793 HSP90AB4PQ58FF6 505 aa22.78■■□□□ 1.24
GMDS-205ENST00000486793 SLC9C2Q5TAH2 1124 aa22.78■■□□□ 1.24
GMDS-205ENST00000486793 MIER1Q8N108 512 aa22.78■■□□□ 1.24
GMDS-205ENST00000486793 APBA2Q99767 749 aa22.78■■□□□ 1.24
GMDS-205ENST00000486793 PFASO15067 1338 aa22.78■■□□□ 1.24
GMDS-205ENST00000486793 GLRX3O76003 335 aaKnown RBP22.77■■□□□ 1.24
GMDS-205ENST00000486793 COL6A1P12109 1028 aa22.77■■□□□ 1.24
GMDS-205ENST00000486793 GUCY1A2P33402 732 aa22.77■■□□□ 1.24
GMDS-205ENST00000486793 EVX2Q03828 476 aa22.77■■□□□ 1.24
GMDS-205ENST00000486793 TTF1Q15361 905 aaPredicted RBP22.77■■□□□ 1.24
GMDS-205ENST00000486793 WDR78Q5VTH9 848 aa22.77■■□□□ 1.24
GMDS-205ENST00000486793 BTBD7Q9P203 1132 aa22.77■■□□□ 1.24
GMDS-205ENST00000486793 ATAD5Q96QE3 1844 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 PDE6AP16499 860 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 PTPREP23469 700 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 GABPAQ06546 454 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 SEPT2Q15019 361 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 LBX2Q6XYB7 198 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 CRNKL1Q9BZJ0 848 aaKnown RBP22.76■■□□□ 1.23
GMDS-205ENST00000486793 RPAP3Q9H6T3 665 aaPredicted RBP22.76■■□□□ 1.23
GMDS-205ENST00000486793 MCM9Q9NXL9 1143 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 FLRT1Q9NZU1 646 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 MAST2Q6P0Q8 1798 aa22.76■■□□□ 1.23
GMDS-205ENST00000486793 SLC15A5A6NIM6 579 aa22.75■■□□□ 1.23
GMDS-205ENST00000486793 APBB1O00213 710 aa22.75■■□□□ 1.23
GMDS-205ENST00000486793 MAGEA10P43363 369 aaPredicted RBP22.75■■□□□ 1.23
GMDS-205ENST00000486793 ZNF532Q9HCE3 1301 aa22.75■■□□□ 1.23
GMDS-205ENST00000486793 A0A1W2PRG0 241 aa22.74■■□□□ 1.23
GMDS-205ENST00000486793 GOLIM4O00461 696 aa22.74■■□□□ 1.23
GMDS-205ENST00000486793 MFSD14CQ5VZR4 134 aa22.74■■□□□ 1.23
GMDS-205ENST00000486793 CLASRPQ8N2M8 674 aaKnown RBP22.74■■□□□ 1.23
GMDS-205ENST00000486793 DNAJC2Q99543 621 aaKnown RBP22.74■■□□□ 1.23
GMDS-205ENST00000486793 BCL11AQ9H165 835 aa22.74■■□□□ 1.23
GMDS-205ENST00000486793 SPDYE16A6NNV3 312 aaPredicted RBP22.73■■□□□ 1.23
GMDS-205ENST00000486793 MPHOSPH10O00566 681 aaKnown RBP22.73■■□□□ 1.23
GMDS-205ENST00000486793 ATP2B2Q01814 1243 aa22.73■■□□□ 1.23
GMDS-205ENST00000486793 SDR42E1Q8WUS8 393 aa22.73■■□□□ 1.23
GMDS-205ENST00000486793 PLXNB2O15031 1838 aa22.73■■□□□ 1.23
GMDS-205ENST00000486793 TCRBV5S4A2TA0A5A2 114 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 HOXC6P09630 235 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 IFIT2P09913 472 aaKnown RBP22.72■■□□□ 1.23
GMDS-205ENST00000486793 COG2Q14746 738 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 LRRC26Q2I0M4 334 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 RPAP2Q8IXW5 612 aaPredicted RBP22.72■■□□□ 1.23
GMDS-205ENST00000486793 LCORLQ8N3X6 602 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.72■■□□□ 1.23
GMDS-205ENST00000486793 KIF1BPQ96EK5 621 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 DCP1AQ9NPI6 582 aaPredicted RBP22.72■■□□□ 1.23
GMDS-205ENST00000486793 HOXC10Q9NYD6 342 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 IVNS1ABPQ9Y6Y0 642 aa22.72■■□□□ 1.23
GMDS-205ENST00000486793 CYP2D6P10635 497 aa22.71■■□□□ 1.23
GMDS-205ENST00000486793 GRB14Q14449 540 aa22.71■■□□□ 1.23
GMDS-205ENST00000486793 SIRT2Q8IXJ6 389 aa22.71■■□□□ 1.23
GMDS-205ENST00000486793 NPLOC4Q8TAT6 608 aa22.71■■□□□ 1.23
GMDS-205ENST00000486793 CNGA1P29973 690 aa22.7■■□□□ 1.22
GMDS-205ENST00000486793 CYP2C19P33261 490 aa22.7■■□□□ 1.22
GMDS-205ENST00000486793 SLC44A5Q8NCS7 719 aa22.7■■□□□ 1.22
GMDS-205ENST00000486793 UBE2OQ9C0C9 1292 aaKnown RBP22.7■■□□□ 1.22
GMDS-205ENST00000486793 ARMT1Q9H993 441 aa22.7■■□□□ 1.22
GMDS-205ENST00000486793 MS4A1P11836 297 aa22.69■■□□□ 1.22
GMDS-205ENST00000486793 LRIT3Q3SXY7 679 aa22.69■■□□□ 1.22
GMDS-205ENST00000486793 KIAA1755Q5JYT7 1200 aa22.69■■□□□ 1.22
GMDS-205ENST00000486793 TDHQ8IZJ6 230 aa22.69■■□□□ 1.22
GMDS-205ENST00000486793 SLC17A8Q8NDX2 589 aa22.69■■□□□ 1.22
GMDS-205ENST00000486793 DYNLL2Q96FJ2 89 aa22.69■■□□□ 1.22
GMDS-205ENST00000486793 MOV10L1Q9BXT6 1211 aaKnown RBP22.69■■□□□ 1.22
GMDS-205ENST00000486793 SENP6Q9GZR1 1112 aaPredicted RBP22.69■■□□□ 1.22
GMDS-205ENST00000486793 DDX20Q9UHI6 824 aaKnown RBP22.69■■□□□ 1.22
GMDS-205ENST00000486793 MYO5AQ9Y4I1 1855 aaKnown RBP22.68■■□□□ 1.22
GMDS-205ENST00000486793 PRKAB2O43741 272 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms