RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 RGS13O14921 159 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 IGSF3O75054 1194 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 RSPO4Q2I0M5 234 aaPredicted RBP9.27□□□□□ -0.93
RTN4-214ENST00000486085 TNNI3KQ59H18 835 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 UNC5AQ6ZN44 842 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 TTC6Q86TZ1 520 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 CDH24Q86UP0 819 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 CKAP2LQ8IYA6 745 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 HNRNPLLQ8WVV9 542 aaKnown RBP9.27□□□□□ -0.93
RTN4-214ENST00000486085 GATA6Q92908 595 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 HIRIP3Q9BW71 556 aaPredicted RBP9.27□□□□□ -0.93
RTN4-214ENST00000486085 TNKS2Q9H2K2 1166 aa9.27□□□□□ -0.93
RTN4-214ENST00000486085 A0A1W2PQH9 124 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 CHMP4BP1P59074 171 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 RBL2Q08999 1139 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 NFIAQ12857 509 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 ZYXQ15942 572 aaKnown RBP9.26□□□□□ -0.93
RTN4-214ENST00000486085 OGFOD3Q6PK18 319 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 TAB3Q8N5C8 712 aaPredicted RBP9.26□□□□□ -0.93
RTN4-214ENST00000486085 PMFBP1Q8TBY8 1022 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 PPP1R13LQ8WUF5 828 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 ACTR10Q9NZ32 417 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 CEP131Q9UPN4 1083 aa9.26□□□□□ -0.93
RTN4-214ENST00000486085 FAM170BA6NMN3 283 aa9.25□□□□□ -0.93
RTN4-214ENST00000486085 UBOX5O94941 541 aa9.25□□□□□ -0.93
RTN4-214ENST00000486085 FSTP19883 344 aa9.25□□□□□ -0.93
RTN4-214ENST00000486085 CASP7P55210 303 aa9.25□□□□□ -0.93
RTN4-214ENST00000486085 TPX2Q9ULW0 747 aaKnown RBP9.25□□□□□ -0.93
RTN4-214ENST00000486085 EOMESO95936 686 aa9.24□□□□□ -0.93
RTN4-214ENST00000486085 IGLV1-40P01703 118 aa9.24□□□□□ -0.93
RTN4-214ENST00000486085 IGHA1P01876 353 aa9.24□□□□□ -0.93
RTN4-214ENST00000486085 F13BP05160 661 aa9.24□□□□□ -0.93
RTN4-214ENST00000486085 C19orf47Q8N9M1 422 aaKnown RBP9.24□□□□□ -0.93
RTN4-214ENST00000486085 DNAJB8Q8NHS0 232 aa9.24□□□□□ -0.93
RTN4-214ENST00000486085 DBNDD2Q9BQY9 259 aa9.24□□□□□ -0.93
RTN4-214ENST00000486085 WDR64B1ANS9 1081 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 RBAK-RBAKDNI3L0D1 243 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 KLF4O43474 513 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 DYRK3O43781 588 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 FURINP09958 794 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 CYP27C1Q4G0S4 372 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 LARP1BQ659C4 914 aaKnown RBP9.23□□□□□ -0.93
RTN4-214ENST00000486085 ZNF765Q7L2R6 523 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 TMEM192Q8IY95 271 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 SHKBP1Q8TBC3 707 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 LTBP3Q9NS15 1303 aa9.23□□□□□ -0.93
RTN4-214ENST00000486085 GSC2O15499 205 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 CCNFP41002 786 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 ETV3P41162 512 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 DUSP27Q5VZP5 1158 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 SLC6A18Q96N87 628 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 TRIM55Q9BYV6 548 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 SLC12A7Q9Y666 1083 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 CNTNAP4Q9C0A0 1308 aa9.22□□□□□ -0.93
RTN4-214ENST00000486085 CLEC3AO75596 197 aa9.21□□□□□ -0.94
RTN4-214ENST00000486085 CYP27A1Q02318 531 aa9.21□□□□□ -0.94
RTN4-214ENST00000486085 ZNF512BQ96KM6 892 aaPredicted RBP9.21□□□□□ -0.94
RTN4-214ENST00000486085 DHRS1Q96LJ7 313 aa9.21□□□□□ -0.94
RTN4-214ENST00000486085 OSBPL1AQ9BXW6 950 aa9.21□□□□□ -0.94
RTN4-214ENST00000486085 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.21□□□□□ -0.94
RTN4-214ENST00000486085 ST7Q9NRC1 585 aa9.21□□□□□ -0.94
RTN4-214ENST00000486085 PCDHB10Q9UN67 800 aa9.21□□□□□ -0.94
RTN4-214ENST00000486085 RAB33AQ14088 237 aa9.2□□□□□ -0.94
RTN4-214ENST00000486085 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
RTN4-214ENST00000486085 ZNF746Q6NUN9 644 aaPredicted RBP9.2□□□□□ -0.94
RTN4-214ENST00000486085 FAM214BQ7L5A3 538 aa9.2□□□□□ -0.94
RTN4-214ENST00000486085 KREMEN1Q96MU8 473 aa9.2□□□□□ -0.94
RTN4-214ENST00000486085 PRDM5Q9NQX1 630 aaPredicted RBP9.2□□□□□ -0.94
RTN4-214ENST00000486085 CYP7A1P22680 504 aa9.19□□□□□ -0.94
RTN4-214ENST00000486085 GNPTABQ3T906 1256 aa9.19□□□□□ -0.94
RTN4-214ENST00000486085 CELF2-AS1Q8N7Q2 184 aa9.19□□□□□ -0.94
RTN4-214ENST00000486085 HEXIM2Q96MH2 286 aaKnown RBP9.19□□□□□ -0.94
RTN4-214ENST00000486085 SEMA6BQ9H3T3 888 aa9.19□□□□□ -0.94
RTN4-214ENST00000486085 PHAXQ9H814 394 aaKnown RBP9.19□□□□□ -0.94
RTN4-214ENST00000486085 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
RTN4-214ENST00000486085 SUCOQ9UBS9 1254 aaKnown RBP9.19□□□□□ -0.94
RTN4-214ENST00000486085 GTF2IRD1Q9UHL9 959 aa9.19□□□□□ -0.94
RTN4-214ENST00000486085 U2SURPO15042 1029 aaKnown RBP9.18□□□□□ -0.94
RTN4-214ENST00000486085 CBX7O95931 251 aa9.18□□□□□ -0.94
RTN4-214ENST00000486085 FXNQ16595 210 aa9.18□□□□□ -0.94
RTN4-214ENST00000486085 SFRP5Q5T4F7 317 aa9.18□□□□□ -0.94
RTN4-214ENST00000486085 TDRD10Q5VZ19 366 aaKnown RBP9.18□□□□□ -0.94
RTN4-214ENST00000486085 VHLLQ6RSH7 139 aa9.18□□□□□ -0.94
RTN4-214ENST00000486085 MICAL1Q8TDZ2 1067 aa9.18□□□□□ -0.94
RTN4-214ENST00000486085 LRRC4CQ9HCJ2 640 aa9.18□□□□□ -0.94
RTN4-214ENST00000486085 ZNF214Q9UL59 606 aaPredicted RBP9.18□□□□□ -0.94
RTN4-214ENST00000486085 COL17A1Q9UMD9 1497 aaPredicted RBP9.17□□□□□ -0.94
RTN4-214ENST00000486085 LRRN2O75325 713 aa9.17□□□□□ -0.94
RTN4-214ENST00000486085 DDAH1O94760 285 aa9.17□□□□□ -0.94
RTN4-214ENST00000486085 TP53P04637 393 aaPredicted RBP9.17□□□□□ -0.94
RTN4-214ENST00000486085 PMS1P54277 932 aaKnown RBP9.17□□□□□ -0.94
RTN4-214ENST00000486085 NBPF12Q5TAG4 269 aaPredicted RBP9.17□□□□□ -0.94
RTN4-214ENST00000486085 NBPF6Q5VWK0 638 aa9.17□□□□□ -0.94
RTN4-214ENST00000486085 C6orf15Q6UXA7 325 aaPredicted RBP9.17□□□□□ -0.94
RTN4-214ENST00000486085 RNF141Q8WVD5 230 aa9.17□□□□□ -0.94
RTN4-214ENST00000486085 NBPF4Q96M43 638 aa9.17□□□□□ -0.94
RTN4-214ENST00000486085 METTL22Q9BUU2 404 aaPredicted RBP9.17□□□□□ -0.94
RTN4-214ENST00000486085 LNPKQ9C0E8 428 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms