RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SLFNL1Q499Z3 407 aa14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 TTC6Q86TZ1 520 aa14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 EVI5LQ96CN4 794 aa14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 HMX1Q9NP08 348 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 SAP30BPQ9UHR5 308 aaKnown RBP14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 GJD2Q9UKL4 321 aa14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 PALD1Q9ULE6 856 aa14.41□□□□□ -0.1
HLA-DOA-204ENST00000485901 MBD4O95243 580 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 CENPBP07199 599 aaPredicted RBP14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 ASNSP08243 561 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 SPP2Q13103 211 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 METTL16Q86W50 562 aaKnown RBP14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 PLEKHM2Q8IWE5 1019 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 LCORLQ8N3X6 602 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 CRACR2BQ8N4Y2 399 aaPredicted RBP14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 APPBP2Q92624 585 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 FSD1Q9BTV5 496 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 OSBPL3Q9H4L5 887 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 ARMT1Q9H993 441 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 ATP8A2Q9NTI2 1148 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 ALPK3Q96L96 1907 aa14.4□□□□□ -0.1
HLA-DOA-204ENST00000485901 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 CHGBP05060 677 aa14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 POLR3DP05423 398 aaPredicted RBP14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 TREML2Q5T2D2 321 aa14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 TICAM2Q86XR7 235 aa14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 SOCS4Q8WXH5 440 aa14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 PAWRQ96IZ0 340 aaKnown RBP14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 GDF15Q99988 308 aa14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 NBPF3Q9H094 633 aa14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 PUS7LQ9H0K6 701 aaKnown RBP14.39□□□□□ -0.11
HLA-DOA-204ENST00000485901 SLURP2P0DP57 97 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 BACE1P56817 501 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 MAP3K21Q5TCX8 1036 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 SDR42E1Q8WUS8 393 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 OSBP2Q969R2 916 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 STRBPQ96SI9 672 aaKnown RBP14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 ASCC2Q9H1I8 757 aaPredicted RBP14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 DCP1AQ9NPI6 582 aaPredicted RBP14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 MCM9Q9NXL9 1143 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 OGDHLQ9ULD0 1010 aa14.38□□□□□ -0.11
HLA-DOA-204ENST00000485901 FAM196BA6NMK8 535 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 PRKAB2O43741 272 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 NEFLP07196 543 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 MAPK4P31152 587 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 HMGCS2P54868 508 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 NUDT12Q9BQG2 462 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 TMOD4Q9NZQ9 345 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 SERPINB13Q9UIV8 391 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 SLC4A4Q9Y6R1 1079 aa14.37□□□□□ -0.11
HLA-DOA-204ENST00000485901 FOCADQ5VW36 1801 aa14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 GNAT2P19087 354 aa14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 AMOTL1Q8IY63 956 aa14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 SLC17A8Q8NDX2 589 aa14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 RILPL2Q969X0 211 aa14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 EHD4Q9H223 541 aa14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 PLXNB2O15031 1838 aa14.36□□□□□ -0.11
HLA-DOA-204ENST00000485901 USP17L10C9JJH3 530 aa14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 PLCD1P51178 756 aa14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 ZMYM1Q5SVZ6 1142 aa14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 GIMAP6Q6P9H5 292 aa14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 GPRC5AQ8NFJ5 357 aa14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 C11orf49Q9H6J7 331 aa14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 TAOK2Q9UL54 1235 aa14.35□□□□□ -0.11
HLA-DOA-204ENST00000485901 PATL2C9JE40 543 aaKnown RBP14.34□□□□□ -0.11
HLA-DOA-204ENST00000485901 GPAA1O43292 621 aa14.34□□□□□ -0.11
HLA-DOA-204ENST00000485901 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
HLA-DOA-204ENST00000485901 CDK5RAP2Q96SN8 1893 aa14.33□□□□□ -0.11
HLA-DOA-204ENST00000485901 GSG1L2A8MUP6 293 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L12C9JPN9 530 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L21D6R901 530 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 M0R2C6 588 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 APPP05067 770 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 PDE4AP27815 886 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 HERVK_113P62684 666 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 RRP1BQ14684 758 aaKnown RBP14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 CENPQQ7L2Z9 268 aaPredicted RBP14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 TRIB2Q92519 343 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP6NLQ92738 828 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 SEC62Q99442 399 aaKnown RBP14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 NACAP1Q9BZK3 213 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 DNAJC18Q9H819 358 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.12
HLA-DOA-204ENST00000485901 DDX60LQ5H9U9 1706 aaKnown RBP14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 COL6A1P12109 1028 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 RGS2P41220 211 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 GABPAQ06546 454 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 MCMDC2Q4G0Z9 681 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 C12orf60Q5U649 245 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 CTR9Q6PD62 1173 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms