RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 UPF3BQ9BZI7 483 aaKnown RBP21.82■■□□□ 1.08
ERCC2-205ENST00000485403 MKNK2Q9HBH9 465 aa21.82■■□□□ 1.08
ERCC2-205ENST00000485403 CABP5Q9NP86 173 aa21.82■■□□□ 1.08
ERCC2-205ENST00000485403 TESPA1A2RU30 521 aaPredicted RBP21.81■■□□□ 1.08
ERCC2-205ENST00000485403 CXCL11O14625 94 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 TM4SF4P48230 202 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 NEK4P51957 841 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 GTF2A2P52657 109 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 SNAPC2Q13487 334 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 AKNAD1Q5T1N1 836 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 BLOC1S2Q6QNY1 142 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 TMEM179Q6ZVK1 233 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 STK11IPQ8N1F8 1099 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 ZSWIM6Q9HCJ5 1215 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 CYP46A1Q9Y6A2 500 aa21.81■■□□□ 1.08
ERCC2-205ENST00000485403 ORC4O43929 436 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 PRDM1O75626 825 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 INHBEP58166 350 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 TRDNQ13061 729 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 MFSD6Q6ZSS7 791 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 ZNF280CQ8ND82 737 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 STAG1Q8WVM7 1258 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 RNF41Q9H4P4 317 aaPredicted RBP21.8■■□□□ 1.08
ERCC2-205ENST00000485403 HMGB1P09429 215 aaKnown RBP21.8■■□□□ 1.08
ERCC2-205ENST00000485403 PCP11498 1178 aaKnown RBP21.8■■□□□ 1.08
ERCC2-205ENST00000485403 CPA1P15085 419 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 SREBF2Q12772 1141 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 SEPT2Q15019 361 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 RUFY3Q7L099 469 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 NCOA7Q8NI08 942 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.8■■□□□ 1.08
ERCC2-205ENST00000485403 AS3MTQ9HBK9 375 aa21.8■■□□□ 1.08
ERCC2-205ENST00000485403 LOC285556D6RIA3 1793 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 PLIN4Q96Q06 1357 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 A0A0G2JLL6 359 aaPredicted RBP21.79■■□□□ 1.08
ERCC2-205ENST00000485403 MPHOSPH10O00566 681 aaKnown RBP21.79■■□□□ 1.08
ERCC2-205ENST00000485403 ST18O60284 1047 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
ERCC2-205ENST00000485403 SPP2Q13103 211 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 MOGSQ13724 837 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 RAB3GAP1Q15042 981 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 PRRT2Q7Z6L0 340 aaPredicted RBP21.79■■□□□ 1.08
ERCC2-205ENST00000485403 RALYLQ86SE5 291 aaKnown RBP21.79■■□□□ 1.08
ERCC2-205ENST00000485403 BRI3BPQ8WY22 251 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 INCENPQ9NQS7 918 aa21.79■■□□□ 1.08
ERCC2-205ENST00000485403 TRIM75PA6NK02 468 aa21.78■■□□□ 1.08
ERCC2-205ENST00000485403 CETPP11597 493 aa21.78■■□□□ 1.08
ERCC2-205ENST00000485403 ZNF444Q8N0Y2 327 aaPredicted RBP21.78■■□□□ 1.08
ERCC2-205ENST00000485403 IL27Q8NEV9 243 aa21.78■■□□□ 1.08
ERCC2-205ENST00000485403 CNNM2Q9H8M5 875 aa21.78■■□□□ 1.08
ERCC2-205ENST00000485403 TOMM22Q9NS69 142 aa21.78■■□□□ 1.08
ERCC2-205ENST00000485403 PDRG1Q9NUG6 133 aa21.78■■□□□ 1.08
ERCC2-205ENST00000485403 CCL15-CCL14A0A0B4J2E2 113 aa21.77■■□□□ 1.08
ERCC2-205ENST00000485403 RPS6KB1P23443 525 aa21.77■■□□□ 1.08
ERCC2-205ENST00000485403 CCL15Q16663 113 aa21.77■■□□□ 1.08
ERCC2-205ENST00000485403 PTPN18Q99952 460 aa21.77■■□□□ 1.08
ERCC2-205ENST00000485403 KRT23Q9C075 422 aa21.77■■□□□ 1.08
ERCC2-205ENST00000485403 WBP1LQ9NX94 342 aa21.77■■□□□ 1.08
ERCC2-205ENST00000485403 NEDD4P46934 1319 aa21.77■■□□□ 1.08
ERCC2-205ENST00000485403 IGKV6D-41A0A0C4DH26 115 aa21.76■■□□□ 1.07
ERCC2-205ENST00000485403 BACE1P56817 501 aa21.76■■□□□ 1.07
ERCC2-205ENST00000485403 SH3D19Q5HYK7 790 aa21.76■■□□□ 1.07
ERCC2-205ENST00000485403 RRP12Q5JTH9 1297 aaKnown RBP21.76■■□□□ 1.07
ERCC2-205ENST00000485403 DHX32Q7L7V1 743 aaKnown RBP21.76■■□□□ 1.07
ERCC2-205ENST00000485403 SIAH1Q8IUQ4 282 aa21.76■■□□□ 1.07
ERCC2-205ENST00000485403 NEDD1Q8NHV4 660 aa21.76■■□□□ 1.07
ERCC2-205ENST00000485403 KANSL2Q9H9L4 492 aa21.76■■□□□ 1.07
ERCC2-205ENST00000485403 MYH4Q9Y623 1939 aa21.76■■□□□ 1.07
ERCC2-205ENST00000485403 B4E1Z4 1266 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 IGF2BP3O00425 579 aaKnown RBP eCLIP21.75■■□□□ 1.07
ERCC2-205ENST00000485403 NT5C2P49902 561 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 COL9A3Q14050 684 aaPredicted RBP21.75■■□□□ 1.07
ERCC2-205ENST00000485403 IFNL1Q8IU54 200 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 MB21D2Q8IYB1 491 aaPredicted RBP21.75■■□□□ 1.07
ERCC2-205ENST00000485403 SNX21Q969T3 373 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 USP17L10C9JJH3 530 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 TFAP4Q01664 338 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 ICA1Q05084 483 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 MTMR2Q13614 643 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 CLEC10AQ8IUN9 316 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 HSCBQ8IWL3 235 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 ACER1Q8TDN7 264 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 TCEANC2Q96MN5 208 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 TTC14Q96N46 770 aa21.75■■□□□ 1.07
ERCC2-205ENST00000485403 A0A1W2PRG0 241 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 C19orf81C9J6K1 198 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 TSPY3P0CV98 308 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 TSPY8P0CW00 308 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 MCM5P33992 734 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 BECN1Q14457 450 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 FAM47AQ5JRC9 791 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 FASTKD5Q7L8L6 764 aaKnown RBP21.74■■□□□ 1.07
ERCC2-205ENST00000485403 KIAA1683Q9H0B3 1180 aa21.74■■□□□ 1.07
ERCC2-205ENST00000485403 BTBD19C9JJ37 291 aa21.73■■□□□ 1.07
ERCC2-205ENST00000485403 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
ERCC2-205ENST00000485403 CD2BP2O95400 341 aaKnown RBP21.73■■□□□ 1.07
ERCC2-205ENST00000485403 HMGCS2P54868 508 aa21.73■■□□□ 1.07
ERCC2-205ENST00000485403 EXOSC10Q01780 885 aaKnown RBP21.73■■□□□ 1.07
ERCC2-205ENST00000485403 PROCA1Q8NCQ7 364 aaPredicted RBP21.73■■□□□ 1.07
ERCC2-205ENST00000485403 NKX2-3Q8TAU0 364 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms