RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 KIF5BP33176 963 aa19.34■□□□□ 0.69
CTSA-207ENST00000484855 SAFBQ15424 915 aaKnown RBP eCLIP19.34■□□□□ 0.69
CTSA-207ENST00000484855 NEDD1Q8NHV4 660 aa19.34■□□□□ 0.69
CTSA-207ENST00000484855 MTFR1LQ9H019 292 aa19.34■□□□□ 0.69
CTSA-207ENST00000484855 STX8Q9UNK0 236 aa19.34■□□□□ 0.69
CTSA-207ENST00000484855 ATF5Q9Y2D1 282 aaPredicted RBP19.34■□□□□ 0.69
CTSA-207ENST00000484855 LETM1O95202 739 aaPredicted RBP19.34■□□□□ 0.69
CTSA-207ENST00000484855 U2AF2P26368 475 aaKnown RBP eCLIP19.34■□□□□ 0.69
CTSA-207ENST00000484855 POLR3EQ9NVU0 708 aa19.34■□□□□ 0.69
CTSA-207ENST00000484855 SERPINA10Q9UK55 444 aa19.34■□□□□ 0.69
CTSA-207ENST00000484855 SIPA1L1O43166 1804 aa19.33■□□□□ 0.69
CTSA-207ENST00000484855 TGFB2P61812 414 aa19.33■□□□□ 0.69
CTSA-207ENST00000484855 GABPAQ06546 454 aa19.33■□□□□ 0.69
CTSA-207ENST00000484855 MAP3K14Q99558 947 aa19.33■□□□□ 0.69
CTSA-207ENST00000484855 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.33■□□□□ 0.69
CTSA-207ENST00000484855 BAZ2BQ9UIF8 2168 aaKnown RBP19.33■□□□□ 0.69
CTSA-207ENST00000484855 KCNJ14Q9UNX9 436 aa19.33■□□□□ 0.69
CTSA-207ENST00000484855 PCDHAC2Q9Y5I4 1007 aa19.33■□□□□ 0.69
CTSA-207ENST00000484855 YEATS4O95619 227 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 HLA-DOAP06340 250 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 XBP1P17861 261 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 NFIAQ12857 509 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 STK38Q15208 465 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 SOGA3Q5TF21 947 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 LARGE2Q8N3Y3 721 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 SRBD1Q8N5C6 995 aaKnown RBP19.33■□□□□ 0.68
CTSA-207ENST00000484855 ZNF277Q9NRM2 450 aaPredicted RBP19.33■□□□□ 0.68
CTSA-207ENST00000484855 CLIC4Q9Y696 253 aa19.33■□□□□ 0.68
CTSA-207ENST00000484855 V9GY48 417 aaPredicted RBP19.33■□□□□ 0.68
CTSA-207ENST00000484855 PLIN4Q96Q06 1357 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 NASPP49321 788 aaPredicted RBP19.32■□□□□ 0.68
CTSA-207ENST00000484855 PKN1Q16512 942 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 DIS3L2Q8IYB7 885 aaKnown RBP19.32■□□□□ 0.68
CTSA-207ENST00000484855 LINC00301Q8NCQ3 95 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 TMEM47Q9BQJ4 181 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 SERPINB13Q9UIV8 391 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 COL4A5P29400 1685 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 hCG_1642624A0A1W2PR95 340 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 ME1P48163 572 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 GRM4Q14833 912 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 ANO1Q5XXA6 986 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 KCNG4Q8TDN1 519 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 SWAP70Q9UH65 585 aa19.32■□□□□ 0.68
CTSA-207ENST00000484855 FER1L6Q2WGJ9 1857 aa19.31■□□□□ 0.68
CTSA-207ENST00000484855 TSPY26PQ9H489 355 aa19.31■□□□□ 0.68
CTSA-207ENST00000484855 DACT1Q9NYF0 836 aa19.31■□□□□ 0.68
CTSA-207ENST00000484855 SF3A1Q15459 793 aaKnown RBP19.3■□□□□ 0.68
CTSA-207ENST00000484855 NOSTRINQ8IVI9 506 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 CEP95Q96GE4 821 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 PANK2Q9BZ23 570 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 NUP62CLQ9H1M0 184 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 FOXP1Q9H334 677 aaPredicted RBP19.3■□□□□ 0.68
CTSA-207ENST00000484855 DDX19AQ9NUU7 478 aaKnown RBP19.3■□□□□ 0.68
CTSA-207ENST00000484855 VPS54Q9P1Q0 977 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 MYO3BQ8WXR4 1341 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
CTSA-207ENST00000484855 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 CACNB3P54284 484 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 RBSNQ9H1K0 784 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 MYH4Q9Y623 1939 aa19.3■□□□□ 0.68
CTSA-207ENST00000484855 SPTLC2O15270 562 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 GNAQP50148 359 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 CFAP100Q494V2 611 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 CCAR1Q8IX12 1150 aaKnown RBP19.29■□□□□ 0.68
CTSA-207ENST00000484855 IDI2Q9BXS1 227 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 MAD2L2Q9UI95 211 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 MTMR7Q9Y216 660 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 NR1I2O75469 434 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 R3HDM1Q15032 1099 aaKnown RBP19.29■□□□□ 0.68
CTSA-207ENST00000484855 RSBN1LQ6PCB5 846 aaPredicted RBP19.29■□□□□ 0.68
CTSA-207ENST00000484855 PCDHA7Q9UN72 937 aa19.29■□□□□ 0.68
CTSA-207ENST00000484855 RAD17O75943 681 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 TOP1P11387 765 aaKnown RBP19.28■□□□□ 0.68
CTSA-207ENST00000484855 AKR1B1P15121 316 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 DALRD3Q5D0E6 543 aaKnown RBP19.28■□□□□ 0.68
CTSA-207ENST00000484855 ZFPM1Q8IX07 1006 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 STAG2Q8N3U4 1231 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 SHISA4Q96DD7 197 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 EHD4Q9H223 541 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 FAM198AQ9UFP1 575 aa19.28■□□□□ 0.68
CTSA-207ENST00000484855 PSMD14O00487 310 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 SCG2P13521 617 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 SHMT1P34896 483 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 TCP10Q12799 353 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 CCDC73Q6ZRK6 1079 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 KLHL34Q8N239 644 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 DHX36Q9H2U1 1008 aaKnown RBP19.27■□□□□ 0.68
CTSA-207ENST00000484855 NOVP48745 357 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 NR5A1Q13285 461 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 PFKFB3Q16875 520 aaPredicted RBP19.27■□□□□ 0.68
CTSA-207ENST00000484855 ADALQ6DHV7 355 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 NIM1KQ8IY84 436 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 CLSTN2Q9H4D0 955 aa19.27■□□□□ 0.68
CTSA-207ENST00000484855 PPP1R1BQ9UD71 204 aaPredicted RBP19.27■□□□□ 0.68
CTSA-207ENST00000484855 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
CTSA-207ENST00000484855 VIL1P09327 827 aaKnown RBP19.26■□□□□ 0.67
CTSA-207ENST00000484855 KRT2P35908 639 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms