RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 DDB1Q16531 1140 aa22.44■■□□□ 1.18
LIMS2-215ENST00000484252 ERCC6LQ2NKX8 1250 aa22.44■■□□□ 1.18
LIMS2-215ENST00000484252 CLEC4GQ6UXB4 293 aa22.44■■□□□ 1.18
LIMS2-215ENST00000484252 SH3RF1Q7Z6J0 888 aa22.44■■□□□ 1.18
LIMS2-215ENST00000484252 GRAMD1CQ8IYS0 662 aa22.44■■□□□ 1.18
LIMS2-215ENST00000484252 TC2NQ8N9U0 490 aa22.44■■□□□ 1.18
LIMS2-215ENST00000484252 GYG1P46976 350 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 NR1I3Q14994 352 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 SF3B3Q15393 1217 aaKnown RBP22.43■■□□□ 1.18
LIMS2-215ENST00000484252 ZNF827Q17R98 1081 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 SHISA4Q96DD7 197 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 BSDC1Q9NW68 430 aaPredicted RBP22.43■■□□□ 1.18
LIMS2-215ENST00000484252 IQSEC3Q9UPP2 1182 aaPredicted RBP22.43■■□□□ 1.18
LIMS2-215ENST00000484252 CACNA1SQ13698 1873 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 A0A1B0GTH6 734 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 VWA3AA6NCI4 1184 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 SEMA3EO15041 775 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 SPATA1Q5VX52 437 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 USP49Q70CQ1 688 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 TRMT44Q8IYL2 757 aaKnown RBP22.43■■□□□ 1.18
LIMS2-215ENST00000484252 DHX58Q96C10 678 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 DLEC1Q9Y238 1755 aa22.43■■□□□ 1.18
LIMS2-215ENST00000484252 COL1A1P02452 1464 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-215ENST00000484252 AHDC1Q5TGY3 1603 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-215ENST00000484252 TPM1P09493 284 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 GOLGA8FQ08AF8 430 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 GOLGA8DPQ0D2H9 430 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 MNS1Q8NEH6 495 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 GSDMAQ96QA5 445 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 V9GY48 417 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-215ENST00000484252 A0A1B0GUL6 1792 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 TROAPQ12815 778 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 TMTC3Q6ZXV5 915 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 PAGE5Q96GU1 130 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 MED15Q96RN5 788 aa22.42■■□□□ 1.18
LIMS2-215ENST00000484252 URI1O94763 535 aaPredicted RBP22.41■■□□□ 1.18
LIMS2-215ENST00000484252 HSP90AA4PQ58FG1 418 aa22.41■■□□□ 1.18
LIMS2-215ENST00000484252 UBXN4Q92575 508 aa22.41■■□□□ 1.18
LIMS2-215ENST00000484252 PANX2Q96RD6 677 aa22.41■■□□□ 1.18
LIMS2-215ENST00000484252 PYM1Q9BRP8 204 aaKnown RBP22.41■■□□□ 1.18
LIMS2-215ENST00000484252 SAMSN1Q9NSI8 373 aaKnown RBP22.41■■□□□ 1.18
LIMS2-215ENST00000484252 SPATA31A1Q5TZJ5 1347 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 ORC4O43929 436 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 PLEKHA8P1O95397 391 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 BMS1Q14692 1282 aaKnown RBP22.4■■□□□ 1.18
LIMS2-215ENST00000484252 TMED8Q6PL24 325 aaPredicted RBP22.4■■□□□ 1.18
LIMS2-215ENST00000484252 SYMPKQ92797 1274 aaKnown RBP22.4■■□□□ 1.18
LIMS2-215ENST00000484252 SMARCC1Q92922 1105 aaPredicted RBP22.4■■□□□ 1.18
LIMS2-215ENST00000484252 TNFRSF25Q93038 417 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 CTAGE1Q96RT6 745 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 ARGLU1Q9NWB6 273 aaPredicted RBP22.4■■□□□ 1.18
LIMS2-215ENST00000484252 PARP3Q9Y6F1 533 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 SCN7AQ01118 1682 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 PDS5AQ29RF7 1337 aaKnown RBP22.4■■□□□ 1.18
LIMS2-215ENST00000484252 A0A0G2JS52 829 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 FAM205CA6NFA0 338 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 EFCAB8A8MWE9 144 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 DYNLL1P63167 89 aaKnown RBP22.4■■□□□ 1.18
LIMS2-215ENST00000484252 CTR9Q6PD62 1173 aa22.4■■□□□ 1.18
LIMS2-215ENST00000484252 SYNRGQ9UMZ2 1314 aa22.39■■□□□ 1.18
LIMS2-215ENST00000484252 A0A087X0B3 334 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 CASQ1P31415 396 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 DPYDQ12882 1025 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 CUL4BQ13620 913 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 PTPN21Q16825 1174 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 ARHGAP29Q52LW3 1261 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 EARS2Q5JPH6 523 aaKnown RBP22.39■■□□□ 1.17
LIMS2-215ENST00000484252 TTC38Q5R3I4 469 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 LRRN4CLQ8ND94 238 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 ACSBG1Q96GR2 724 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 EPSTI1Q96J88 318 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 NAA15Q9BXJ9 866 aaKnown RBP22.39■■□□□ 1.17
LIMS2-215ENST00000484252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.39■■□□□ 1.17
LIMS2-215ENST00000484252 COL4A1P02462 1669 aa22.39■■□□□ 1.17
LIMS2-215ENST00000484252 AKR1B15C9JRZ8 316 aaPredicted RBP22.38■■□□□ 1.17
LIMS2-215ENST00000484252 RGL2O15211 777 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 TRAPPC10P48553 1259 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 ADKP55263 362 aaKnown RBP22.38■■□□□ 1.17
LIMS2-215ENST00000484252 CTCFLQ8NI51 663 aaPredicted RBP22.38■■□□□ 1.17
LIMS2-215ENST00000484252 MINPP1Q9UNW1 487 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 MYH14Q7Z406 1995 aaKnown RBP22.38■■□□□ 1.17
LIMS2-215ENST00000484252 CNTNAP5Q8WYK1 1306 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 NPHP1O15259 732 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 TADA3O75528 432 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 PRDM1O75626 825 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 ATP2C1P98194 919 aaPredicted RBP22.38■■□□□ 1.17
LIMS2-215ENST00000484252 ERFEQ4G0M1 354 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 FAM84BQ96KN1 310 aaPredicted RBP22.38■■□□□ 1.17
LIMS2-215ENST00000484252 ZNF446Q9NWS9 450 aa22.38■■□□□ 1.17
LIMS2-215ENST00000484252 AFMP43652 599 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 CDKAL1Q5VV42 579 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 APTXQ7Z2E3 356 aaKnown RBP22.37■■□□□ 1.17
LIMS2-215ENST00000484252 CYP2D7A0A087X1C5 515 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 SMIM22K7EJ46 135 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 GNG11P61952 73 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 NPY5RQ15761 445 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 FILIP1LQ4L180 1135 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 FBXO33Q7Z6M2 555 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 PPFIBP1Q86W92 1011 aa22.37■■□□□ 1.17
LIMS2-215ENST00000484252 MARCH10Q8NA82 808 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms