RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 CRY2Q49AN0 593 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 MEX3CQ5U5Q3 659 aaKnown RBP8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 KANK3Q6NY19 840 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 SHC4Q6S5L8 630 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 FAM196AQ6ZSG2 479 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 TMTC3Q6ZXV5 915 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 AMOTL1Q8IY63 956 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 CTCFLQ8NI51 663 aaPredicted RBP8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 RPGRQ92834 1020 aaKnown RBP8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 CCDC34Q96HJ3 373 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 PRIMPOLQ96LW4 560 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 TTC12Q9H892 705 aaPredicted RBP8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 BRMS1Q9HCU9 246 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 AATFQ9NY61 560 aaKnown RBP eCLIP8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 FAM13BQ9NYF5 915 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 TFCP2L1Q9NZI6 479 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 LRRC37AA6NMS7 1700 aa8.49□□□□□ -1.05
SHROOM3-206ENST00000484236 BBOX1O75936 387 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 PLCG2P16885 1265 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 KLRK1P26718 216 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 MARCKSP29966 332 aaPredicted RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 HOXA10P31260 410 aaPredicted RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 TIE1P35590 1138 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 KRT2P35908 639 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 TRAPPC10P48553 1259 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 GNAQP50148 359 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 TOB1P50616 345 aaPredicted RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 GSDMDP57764 484 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 CHAF1AQ13111 956 aaPredicted RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 CT47A1Q5JQC4 288 aaPredicted RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 C12orf60Q5U649 245 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 CCDC186Q7Z3E2 898 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 DGKHQ86XP1 1220 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 SLF2Q8IX21 1173 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 SPC24Q8NBT2 197 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 RBM17Q96I25 401 aaKnown RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 PHF20Q9BVI0 1012 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 KCNF1Q9H3M0 494 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 TCP11L1Q9NUJ3 509 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 ANKIB1Q9P2G1 1089 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 IMPACTQ9P2X3 320 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 CLIP2Q9UDT6 1046 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 FBXO2Q9UK22 296 aaPredicted RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 KCNH3Q9ULD8 1083 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 SRPRBQ9Y5M8 271 aaKnown RBP8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 AFF2P51816 1311 aa8.48□□□□□ -1.05
SHROOM3-206ENST00000484236 CDK5RAP2Q96SN8 1893 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 WTIPA6NIX2 430 aaPredicted RBP8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 PTGS1P23219 599 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 PRDX5P30044 214 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 PKN1Q16512 942 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 PRR5LQ6MZQ0 368 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 OLFM4Q6UX06 510 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 KRBA2Q6ZNG9 492 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 SEPT12Q8IYM1 358 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 STK11IPQ8N1F8 1099 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 TRIML1Q8N9V2 468 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 CNNM3Q8NE01 707 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 TBC1D22AQ8WUA7 517 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 FERMT2Q96AC1 680 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 ZNF830Q96NB3 372 aaPredicted RBP8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 CRAMP1Q96RY5 1269 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 PYM1Q9BRP8 204 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 SH3GLB2Q9NR46 395 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 DACH1Q9UI36 760 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 KCNJ14Q9UNX9 436 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 R3HCC1Q9Y3T6 440 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 CNTNAP5Q8WYK1 1306 aa8.47□□□□□ -1.05
SHROOM3-206ENST00000484236 FOCADQ5VW36 1801 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 CYP2D7A0A087X1C5 515 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 KLRG2A4D1S0 409 aaPredicted RBP8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 TSPY2A6NKD2 308 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 DYNC1I1O14576 645 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 MAP3K13O43283 966 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 CBFA2T2O43439 604 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 SERPINB2P05120 415 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 GYS1P13807 737 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 IL1R1P14778 569 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 CALML3P27482 149 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 USP5P45974 858 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 DPCR1Q3MIW9 517 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 DNTTIP2Q5QJE6 756 aaKnown RBP8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 NT5DC1Q5TFE4 455 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 SMIM5Q71RC9 77 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 TXNRD3Q86VQ6 643 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 AMIGO3Q86WK7 504 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 AOPEPQ8N6M6 819 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 LZTS2Q9BRK4 669 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 OSBPL5Q9H0X9 879 aaPredicted RBP8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 KCND1Q9NSA2 647 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 MCM9Q9NXL9 1143 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 GGA1Q9UJY5 639 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms