RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CYP2C19P33261 490 aa15.82■□□□□ 0.12
UBR4-213ENST00000483922 GUCY1A2P33402 732 aa15.82■□□□□ 0.12
UBR4-213ENST00000483922 ATN1P54259 1190 aaPredicted RBP15.82■□□□□ 0.12
UBR4-213ENST00000483922 EVX2Q03828 476 aa15.82■□□□□ 0.12
UBR4-213ENST00000483922 POLA2Q14181 598 aa15.82■□□□□ 0.12
UBR4-213ENST00000483922 ZNF512BQ96KM6 892 aaPredicted RBP15.82■□□□□ 0.12
UBR4-213ENST00000483922 GPR108Q9NPR9 543 aa15.82■□□□□ 0.12
UBR4-213ENST00000483922 TLR7Q9NYK1 1049 aaKnown RBP15.82■□□□□ 0.12
UBR4-213ENST00000483922 FRMPD3Q5JV73 1810 aa15.82■□□□□ 0.12
UBR4-213ENST00000483922 USP17L15C9J2P7 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L13C9JLJ4 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L11C9JVI0 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L18D6R9N7 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L22D6RA61 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L17D6RBQ6 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L19D6RCP7 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L20D6RJB6 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 HOXC6P09630 235 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 USP17L24Q0WX57 530 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 TTC39AQ5SRH9 613 aa15.81■□□□□ 0.12
UBR4-213ENST00000483922 DDX20Q9UHI6 824 aaKnown RBP15.81■□□□□ 0.12
UBR4-213ENST00000483922 PLCG2P16885 1265 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 VCAM1P19320 739 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 CYP7A1P22680 504 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 PLCD1P51178 756 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 GRB14Q14449 540 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 LBX2Q6XYB7 198 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
UBR4-213ENST00000483922 MIGA1Q8NAN2 632 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 SSH3Q8TE77 659 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 LPAR1Q92633 364 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 CLUAP1Q96AJ1 413 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 NOL10Q9BSC4 688 aaKnown RBP15.8■□□□□ 0.12
UBR4-213ENST00000483922 KIAA1683Q9H0B3 1180 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 DBNLQ9UJU6 430 aaKnown RBP15.8■□□□□ 0.12
UBR4-213ENST00000483922 MAST2Q6P0Q8 1798 aa15.8■□□□□ 0.12
UBR4-213ENST00000483922 SLC15A5A6NIM6 579 aa15.79■□□□□ 0.12
UBR4-213ENST00000483922 SHHQ15465 462 aa15.79■□□□□ 0.12
UBR4-213ENST00000483922 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
UBR4-213ENST00000483922 C9orf50Q5SZB4 431 aa15.79■□□□□ 0.12
UBR4-213ENST00000483922 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
UBR4-213ENST00000483922 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
UBR4-213ENST00000483922 ANTXR1Q9H6X2 564 aa15.79■□□□□ 0.12
UBR4-213ENST00000483922 A0A1W2PRG0 241 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 SPDYE16A6NNV3 312 aaPredicted RBP15.78■□□□□ 0.12
UBR4-213ENST00000483922 SHMT1P34896 483 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 ATP8B2P98198 1209 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 RAB3GAP1Q15042 981 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 KIAA1755Q5JYT7 1200 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 GJC2Q5T442 439 aaPredicted RBP15.78■□□□□ 0.12
UBR4-213ENST00000483922 MFSD14CQ5VZR4 134 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 ATF7IPQ6VMQ6 1270 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 GTF3C2Q8WUA4 911 aaPredicted RBP15.78■□□□□ 0.12
UBR4-213ENST00000483922 EAF2Q96CJ1 260 aaPredicted RBP15.78■□□□□ 0.12
UBR4-213ENST00000483922 MUC3AQ02505 3323 aa15.78■□□□□ 0.12
UBR4-213ENST00000483922 DNM1LO00429 736 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 COBLO75128 1261 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 HLA-DOAP06340 250 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 CYBAP13498 195 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 CNGA1P29973 690 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 RTP1P59025 263 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 ATP2B2Q01814 1243 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 PRAMEF19Q5SWL8 479 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 WDR78Q5VTH9 848 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 ANO1Q5XXA6 986 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 SH3RF1Q7Z6J0 888 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 EHD4Q9H223 541 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 RPAP3Q9H6T3 665 aaPredicted RBP15.77■□□□□ 0.12
UBR4-213ENST00000483922 C1orf115Q9H7X2 142 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 SERPINB13Q9UIV8 391 aa15.77■□□□□ 0.12
UBR4-213ENST00000483922 LTBP2Q14767 1821 aa15.76■□□□□ 0.11
UBR4-213ENST00000483922 ITGB8P26012 769 aa15.76■□□□□ 0.11
UBR4-213ENST00000483922 ABCB5Q2M3G0 1257 aa15.76■□□□□ 0.11
UBR4-213ENST00000483922 CERKLQ49MI3 558 aaPredicted RBP15.76■□□□□ 0.11
UBR4-213ENST00000483922 SLC39A5Q6ZMH5 540 aa15.76■□□□□ 0.11
UBR4-213ENST00000483922 SIAH1Q8IUQ4 282 aa15.76■□□□□ 0.11
UBR4-213ENST00000483922 MAGEB6Q8N7X4 407 aa15.76■□□□□ 0.11
UBR4-213ENST00000483922 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
UBR4-213ENST00000483922 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
UBR4-213ENST00000483922 RIOK1Q9BRS2 568 aaKnown RBP15.76■□□□□ 0.11
UBR4-213ENST00000483922 MOV10L1Q9BXT6 1211 aaKnown RBP15.76■□□□□ 0.11
UBR4-213ENST00000483922 TTYH1Q9H313 450 aaPredicted RBP15.76■□□□□ 0.11
UBR4-213ENST00000483922 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
UBR4-213ENST00000483922 NOP58Q9Y2X3 529 aaKnown RBP15.76■□□□□ 0.11
UBR4-213ENST00000483922 MYH1P12882 1939 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 RLFQ13129 1914 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 TRIM43BA6NCK2 446 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 SURF6O75683 361 aaKnown RBP15.75■□□□□ 0.11
UBR4-213ENST00000483922 USP5P45974 858 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 CCNA1P78396 465 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 GABPAQ06546 454 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 SEPT2Q15019 361 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 TRIM43Q96BQ3 446 aaPredicted RBP15.75■□□□□ 0.11
UBR4-213ENST00000483922 FEZ1Q99689 392 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
UBR4-213ENST00000483922 ATP11BQ9Y2G3 1177 aa15.75■□□□□ 0.11
UBR4-213ENST00000483922 IDH1O75874 414 aaKnown RBP15.74■□□□□ 0.11
UBR4-213ENST00000483922 GLRX3O76003 335 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms