RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 DENND2AQ9ULE3 1009 aa13.33□□□□□ -0.28
VTI1A-205ENST00000483122 CCDC189A1A4V9 331 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 TARSL2A2RTX5 802 aaKnown RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 CCT6AP40227 531 aaKnown RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 TIMM10P62072 90 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 CDKAL1Q5VV42 579 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 TRIML1Q8N9V2 468 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 CHP1Q99653 195 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 SH3GL2Q99962 352 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 SYNRGQ9UMZ2 1314 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 H0YHG0 523 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 ACTN4O43707 911 aaKnown RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 MYL6BP14649 208 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 CASP1P29466 404 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 SETQ01105 290 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 TRDNQ13061 729 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 NBPF14Q5TI25 921 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
VTI1A-205ENST00000483122 SMYD4Q8IYR2 804 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 ZKSCAN4Q969J2 545 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 A1CFQ9NQ94 594 aaKnown RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-205ENST00000483122 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
VTI1A-205ENST00000483122 FGAP02671 866 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 DDR1Q08345 913 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
VTI1A-205ENST00000483122 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 GIMAP7Q8NHV1 300 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 KCNG1Q9UIX4 513 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 SAR1BQ9Y6B6 198 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 KDM6AO15550 1401 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-205ENST00000483122 PDE2AO00408 941 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-205ENST00000483122 PSMD14O00487 310 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 FSBPO95073 299 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 TOB1P50616 345 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-205ENST00000483122 PDCLQ13371 301 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 CUL4BQ13620 913 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 AKAP4Q5JQC9 854 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 CARD10Q9BWT7 1032 aa13.31□□□□□ -0.28
VTI1A-205ENST00000483122 ZNF185O15231 689 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 C21orf2O43822 256 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
VTI1A-205ENST00000483122 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
VTI1A-205ENST00000483122 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
VTI1A-205ENST00000483122 OTUD6BQ8N6M0 293 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 AENQ8WTP8 325 aaKnown RBP13.3□□□□□ -0.28
VTI1A-205ENST00000483122 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 ARL8AQ96BM9 186 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 NUP88Q99567 741 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-205ENST00000483122 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 MCM8Q9UJA3 840 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 CPDO75976 1380 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 NFAT5O94916 1531 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 NDUFAB1O14561 156 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 PTPREP23469 700 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 SPATA20Q8TB22 786 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 METTL22Q9BUU2 404 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-205ENST00000483122 POLD4Q9HCU8 107 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 EPN1Q9Y6I3 576 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-205ENST00000483122 ITIH6Q6UXX5 1313 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 LMO7Q8WWI1 1683 aa13.3□□□□□ -0.28
VTI1A-205ENST00000483122 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 RANBP6O60518 1105 aaKnown RBP13.29□□□□□ -0.28
VTI1A-205ENST00000483122 NDUFA10O95299 355 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
VTI1A-205ENST00000483122 AFMP43652 599 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 EZH2Q15910 746 aaKnown RBP13.29□□□□□ -0.28
VTI1A-205ENST00000483122 TTMPQ5BVD1 217 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 PAPD7Q5XG87 772 aaKnown RBP13.29□□□□□ -0.28
VTI1A-205ENST00000483122 CTAGE1Q96RT6 745 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 VPS16Q9H269 839 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 GOLGA8KD6RF30 607 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 MEFVO15553 781 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-205ENST00000483122 KIAA0754O94854 1291 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 IBSPP21815 317 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-205ENST00000483122 ELF1P32519 619 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 KRT9P35527 623 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 ATP2B2Q01814 1243 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 SATB1Q01826 763 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 DPYDQ12882 1025 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 KRT31Q15323 416 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 RABL6Q3YEC7 729 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms