RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 EHD4Q9H223 541 aa25.6■■□□□ 1.69
RUNX1-216ENST00000482318 FSD2A1L4K1 749 aa25.59■■□□□ 1.69
RUNX1-216ENST00000482318 VIL1P09327 827 aaKnown RBP25.59■■□□□ 1.69
RUNX1-216ENST00000482318 FUT2Q10981 343 aa25.59■■□□□ 1.69
RUNX1-216ENST00000482318 SAFBQ15424 915 aaKnown RBP eCLIP25.59■■□□□ 1.699e-7■□□□□ 8.7
RUNX1-216ENST00000482318 GJB4Q9NTQ9 266 aa25.59■■□□□ 1.69
RUNX1-216ENST00000482318 RBM27Q9P2N5 1060 aaKnown RBP25.59■■□□□ 1.69
RUNX1-216ENST00000482318 HDAC9Q9UKV0 1011 aa25.59■■□□□ 1.69
RUNX1-216ENST00000482318 ZNRF3Q9ULT6 936 aa25.59■■□□□ 1.69
RUNX1-216ENST00000482318 SGIP1Q9BQI5 828 aa25.58■■□□□ 1.69
RUNX1-216ENST00000482318 RCOR1Q9UKL0 485 aa25.58■■□□□ 1.69
RUNX1-216ENST00000482318 STX8Q9UNK0 236 aa25.58■■□□□ 1.69
RUNX1-216ENST00000482318 GNAQP50148 359 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 MYSM1Q5VVJ2 828 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 CMTR1Q8N1G2 835 aaKnown RBP25.57■■□□□ 1.68
RUNX1-216ENST00000482318 TAOK3Q9H2K8 898 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 PPP1R1BQ9UD71 204 aaPredicted RBP25.57■■□□□ 1.68
RUNX1-216ENST00000482318 COL4A5P29400 1685 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 PLEKHA8P1O95397 391 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 NFIAQ12857 509 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 CFAP100Q494V2 611 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 USP28Q96RU2 1077 aa25.57■■□□□ 1.68
RUNX1-216ENST00000482318 PSMD14O00487 310 aa25.56■■□□□ 1.68
RUNX1-216ENST00000482318 MMP1P03956 469 aa25.56■■□□□ 1.68
RUNX1-216ENST00000482318 U2AF2P26368 475 aaKnown RBP eCLIP25.56■■□□□ 1.681e-9■■■□□ 15.3
RUNX1-216ENST00000482318 GUCY1A2P33402 732 aa25.56■■□□□ 1.68
RUNX1-216ENST00000482318 GRM4Q14833 912 aa25.56■■□□□ 1.68
RUNX1-216ENST00000482318 OGFOD1Q8N543 542 aa25.56■■□□□ 1.68
RUNX1-216ENST00000482318 TMEM47Q9BQJ4 181 aa25.56■■□□□ 1.68
RUNX1-216ENST00000482318 RTEL1Q9NZ71 1219 aa25.56■■□□□ 1.68
RUNX1-216ENST00000482318 CNTNAP5Q8WYK1 1306 aa25.55■■□□□ 1.68
RUNX1-216ENST00000482318 RAD17O75943 681 aa25.55■■□□□ 1.68
RUNX1-216ENST00000482318 CCDC183Q5T5S1 534 aa25.55■■□□□ 1.68
RUNX1-216ENST00000482318 POLR3EQ9NVU0 708 aa25.55■■□□□ 1.68
RUNX1-216ENST00000482318 COL2A1P02458 1487 aaPredicted RBP25.55■■□□□ 1.68
RUNX1-216ENST00000482318 KIF28PB7ZC32 967 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 LETM1O95202 739 aaPredicted RBP25.54■■□□□ 1.68
RUNX1-216ENST00000482318 TOP1P11387 765 aaKnown RBP25.54■■□□□ 1.68
RUNX1-216ENST00000482318 NOVP48745 357 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 PPP4R3BQ5MIZ7 849 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 KLHL34Q8N239 644 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 AGBL3Q8NEM8 1001 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 GMLQ99445 158 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 ENTPD3O75355 529 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 YEATS4O95619 227 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 CEBPZQ03701 1054 aaKnown RBP25.54■■□□□ 1.68
RUNX1-216ENST00000482318 TMOD2Q9NZR1 351 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 PI4KBQ9UBF8 816 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 FAM198AQ9UFP1 575 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 PCDHAC2Q9Y5I4 1007 aa25.54■■□□□ 1.68
RUNX1-216ENST00000482318 V9GY48 417 aaPredicted RBP25.54■■□□□ 1.68
RUNX1-216ENST00000482318 SIPA1L1O43166 1804 aa25.53■■□□□ 1.68
RUNX1-216ENST00000482318 UBE2Q2LH0YL09 131 aa25.53■■□□□ 1.68
RUNX1-216ENST00000482318 SRBD1Q8N5C6 995 aaKnown RBP25.53■■□□□ 1.68
RUNX1-216ENST00000482318 JDP2Q8WYK2 163 aa25.53■■□□□ 1.68
RUNX1-216ENST00000482318 CEP95Q96GE4 821 aa25.53■■□□□ 1.68
RUNX1-216ENST00000482318 CCDC17Q96LX7 622 aa25.53■■□□□ 1.68
RUNX1-216ENST00000482318 LZTS2Q9BRK4 669 aa25.53■■□□□ 1.68
RUNX1-216ENST00000482318 FOXP1Q9H334 677 aaPredicted RBP25.53■■□□□ 1.68
RUNX1-216ENST00000482318 MRE11P49959 708 aa25.52■■□□□ 1.68
RUNX1-216ENST00000482318 PKN1Q16512 942 aa25.52■■□□□ 1.68
RUNX1-216ENST00000482318 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.52■■□□□ 1.68
RUNX1-216ENST00000482318 GREB1LQ9C091 1923 aaPredicted RBP25.52■■□□□ 1.68
RUNX1-216ENST00000482318 SHMT1P34896 483 aa25.51■■□□□ 1.68
RUNX1-216ENST00000482318 TCP10Q12799 353 aa25.51■■□□□ 1.68
RUNX1-216ENST00000482318 KCNG4Q8TDN1 519 aa25.51■■□□□ 1.68
RUNX1-216ENST00000482318 TDRD3Q9H7E2 651 aaKnown RBP25.51■■□□□ 1.68
RUNX1-216ENST00000482318 ARFGEF1Q9Y6D6 1849 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 ATRNL1Q5VV63 1379 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 SPDYE2BA6NHP3 402 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 SPDYE6P0CI01 402 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 NASPP49321 788 aaPredicted RBP25.51■■□□□ 1.67
RUNX1-216ENST00000482318 CACNB3P54284 484 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 DLGAP5Q15398 846 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 TPRNQ4KMQ1 711 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 NOSTRINQ8IVI9 506 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 ZSCAN29Q8IWY8 852 aaPredicted RBP25.51■■□□□ 1.67
RUNX1-216ENST00000482318 DIS3L2Q8IYB7 885 aaKnown RBP25.51■■□□□ 1.67
RUNX1-216ENST00000482318 BICD2Q8TD16 824 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 TRIM34Q9BYJ4 488 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 LTBP3Q9NS15 1303 aa25.51■■□□□ 1.67
RUNX1-216ENST00000482318 PTGER2P43116 358 aa25.5■■□□□ 1.67
RUNX1-216ENST00000482318 MMP14P50281 582 aa25.5■■□□□ 1.67
RUNX1-216ENST00000482318 STK38Q15208 465 aa25.5■■□□□ 1.67
RUNX1-216ENST00000482318 LRSAM1Q6UWE0 723 aa25.5■■□□□ 1.67
RUNX1-216ENST00000482318 FOXP4Q8IVH2 680 aaPredicted RBP25.5■■□□□ 1.67
RUNX1-216ENST00000482318 PGBD1Q96JS3 809 aa25.5■■□□□ 1.67
RUNX1-216ENST00000482318 PRMT6Q96LA8 375 aaPredicted RBP25.5■■□□□ 1.67
RUNX1-216ENST00000482318 FTOQ9C0B1 505 aaKnown RBP eCLIP25.5■■□□□ 1.67
RUNX1-216ENST00000482318 MTMR4Q9NYA4 1195 aa25.5■■□□□ 1.67
RUNX1-216ENST00000482318 MAD2L2Q9UI95 211 aa25.5■■□□□ 1.67
RUNX1-216ENST00000482318 IGKV6D-41A0A0C4DH26 115 aa25.49■■□□□ 1.67
RUNX1-216ENST00000482318 SYCE3A1L190 88 aa25.49■■□□□ 1.67
RUNX1-216ENST00000482318 PSDA5PKW4 1024 aaPredicted RBP25.49■■□□□ 1.67
RUNX1-216ENST00000482318 AKR1B1P15121 316 aa25.49■■□□□ 1.67
RUNX1-216ENST00000482318 ANO1Q5XXA6 986 aa25.49■■□□□ 1.67
RUNX1-216ENST00000482318 ZFPM1Q8IX07 1006 aa25.49■■□□□ 1.67
RUNX1-216ENST00000482318 LINC00301Q8NCQ3 95 aa25.49■■□□□ 1.67
RUNX1-216ENST00000482318 BRMS1Q9HCU9 246 aa25.49■■□□□ 1.67
RUNX1-216ENST00000482318 KCNJ14Q9UNX9 436 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 360.1 ms