RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 KCNQ3O43525 872 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 GAS7O60861 476 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 GAS8O95995 478 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 BTDP43251 543 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 MSL1Q68DK7 614 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 PKD2L1Q9P0L9 805 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 MTRF1LQ9UGC7 380 aaKnown RBP10.56□□□□□ -0.72
GARNL3-216ENST00000481242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
GARNL3-216ENST00000481242 SMCO2A6NFE2 343 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 GNA14O95837 355 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 POLR2MP0CAP2 368 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 STX17P56962 302 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 TNNC1P63316 161 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 TUBB2AQ13885 445 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 SEPT12Q8IYM1 358 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 CSGALNACT2Q8N6G5 542 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 TUBB2BQ9BVA1 445 aa10.56□□□□□ -0.72
GARNL3-216ENST00000481242 NPR1P16066 1061 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 CLUL1Q15846 466 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 BRINP3Q76B58 766 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 FBXO11Q86XK2 927 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 OTUD7AQ8TE49 926 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 SYNMO15061 1565 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 A0A1B0GVL5 298 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ZNF445P59923 1031 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ARID5AQ03989 594 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 PAK1Q13153 545 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 GSTA5Q7RTV2 222 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 GLG1Q92896 1179 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 JPH2Q9BR39 696 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 RABGAP1Q9Y3P9 1069 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 PCDHB13Q9Y5F0 798 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 CDK12Q9NYV4 1490 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 SHROOM2Q13796 1616 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 hCG_1984214I3L0E3 225 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 TNFAIP3P21580 790 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 FANCBQ8NB91 859 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 PSTPIP2Q9H939 334 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 TXNDC16Q9P2K2 825 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ABCC3O15438 1527 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 AKR1B15C9JRZ8 316 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 PTGS1P23219 599 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 BCAMP50895 628 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 RAPGEF1Q13905 1077 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ABCB5Q2M3G0 1257 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ZBTB8OSQ8IWT0 167 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 TTC14Q96N46 770 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 GREM2Q9H772 168 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 RTEL1Q9NZ71 1219 aa10.55□□□□□ -0.72
GARNL3-216ENST00000481242 V9GYY5 206 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-216ENST00000481242 ZNF335Q9H4Z2 1342 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-216ENST00000481242 RPS6KA4O75676 772 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 BCRP11274 1271 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 CABP7Q86V35 215 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 RGS22Q8NE09 1264 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 MAK16Q9BXY0 300 aaKnown RBP10.54□□□□□ -0.72
GARNL3-216ENST00000481242 MLXIPQ9HAP2 919 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 STAP2Q9UGK3 403 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 A2ML1A8K2U0 1454 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 A0A1W2PRG0 241 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 OPA1O60313 960 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 PRKG1Q13976 671 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 USH1GQ495M9 461 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 ASPRV1Q53RT3 343 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 CCDC50Q8IVM0 306 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 PPM1EQ8WY54 764 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 ARFGAP3Q9NP61 516 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.54□□□□□ -0.72
GARNL3-216ENST00000481242 MAP3K4Q9Y6R4 1608 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 NDC80O14777 642 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 EXOC3O60645 756 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 CALCOCO2Q13137 446 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 SEL1L2Q5TEA6 688 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 C6orf163Q5TEZ5 329 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 SLFN13Q68D06 897 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 MIER3Q7Z3K6 550 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 BLIDQ8IZY5 108 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 SLC17A8Q8NDX2 589 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 PLIN2Q99541 437 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 KANSL2Q9H9L4 492 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 IFNKQ9P0W0 207 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 DNAI1Q9UI46 699 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 KIF1BO60333 1816 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 KLRF2D3W0D1 207 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 POLR2DO15514 142 aaKnown RBP10.54□□□□□ -0.72
GARNL3-216ENST00000481242 HARSP12081 509 aaKnown RBP10.54□□□□□ -0.72
GARNL3-216ENST00000481242 TMOD1P28289 359 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 ANKRD35Q8N283 1001 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 MYCT1Q8N699 235 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 GTF3C6Q969F1 213 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 PLEKHF1Q96S99 279 aa10.54□□□□□ -0.72
GARNL3-216ENST00000481242 NSRP1Q9H0G5 558 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms