RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 NEDD1Q8NHV4 660 aa32.21■■■□□ 2.75
TNFRSF25-213ENST00000480393 PGBD1Q96JS3 809 aa32.21■■■□□ 2.75
TNFRSF25-213ENST00000480393 PIM2Q9P1W9 311 aa32.21■■■□□ 2.75
TNFRSF25-213ENST00000480393 STX8Q9UNK0 236 aa32.21■■■□□ 2.75
TNFRSF25-213ENST00000480393 MMP1P03956 469 aa32.2■■■□□ 2.75
TNFRSF25-213ENST00000480393 FUT2Q10981 343 aa32.2■■■□□ 2.75
TNFRSF25-213ENST00000480393 MAP3K14Q99558 947 aa32.2■■■□□ 2.74
TNFRSF25-213ENST00000480393 ZNF277Q9NRM2 450 aaPredicted RBP32.2■■■□□ 2.74
TNFRSF25-213ENST00000480393 CNTNAP5Q8WYK1 1306 aa32.19■■■□□ 2.74
TNFRSF25-213ENST00000480393 XRCC6P12956 609 aaKnown RBP eCLIP32.19■■■□□ 2.74
TNFRSF25-213ENST00000480393 STK38Q15208 465 aa32.19■■■□□ 2.74
TNFRSF25-213ENST00000480393 POLR3EQ9NVU0 708 aa32.19■■■□□ 2.74
TNFRSF25-213ENST00000480393 SWAP70Q9UH65 585 aa32.19■■■□□ 2.74
TNFRSF25-213ENST00000480393 U2AF2P26368 475 aaKnown RBP eCLIP32.18■■■□□ 2.74
TNFRSF25-213ENST00000480393 SERPINB13Q9UIV8 391 aa32.18■■■□□ 2.74
TNFRSF25-213ENST00000480393 KCNJ14Q9UNX9 436 aa32.18■■■□□ 2.74
TNFRSF25-213ENST00000480393 V9GY48 417 aaPredicted RBP32.18■■■□□ 2.74
TNFRSF25-213ENST00000480393 MYO3BQ8WXR4 1341 aa32.18■■■□□ 2.74
TNFRSF25-213ENST00000480393 YEATS4O95619 227 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 LIG1P18858 919 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 ME1P48163 572 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 VPS33BQ9H267 617 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 GABPAQ06546 454 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 NFIAQ12857 509 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 GRM4Q14833 912 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 SRBD1Q8N5C6 995 aaKnown RBP32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 TMEM47Q9BQJ4 181 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 PCDHAC2Q9Y5I4 1007 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 CLIC4Q9Y696 253 aa32.17■■■□□ 2.74
TNFRSF25-213ENST00000480393 MYH6P13533 1939 aa32.16■■■□□ 2.74
TNFRSF25-213ENST00000480393 SF3A1Q15459 793 aaKnown RBP32.16■■■□□ 2.74
TNFRSF25-213ENST00000480393 DIS3L2Q8IYB7 885 aaKnown RBP32.16■■■□□ 2.74
TNFRSF25-213ENST00000480393 KCNG4Q8TDN1 519 aa32.16■■■□□ 2.74
TNFRSF25-213ENST00000480393 NASPP49321 788 aaPredicted RBP32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 GNAQP50148 359 aa32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 R3HDM1Q15032 1099 aaKnown RBP32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 PKN1Q16512 942 aa32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 DALRD3Q5D0E6 543 aaKnown RBP32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 ANO1Q5XXA6 986 aa32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 TSPY26PQ9H489 355 aa32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 PLIN4Q96Q06 1357 aa32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 PSME4Q14997 1843 aa32.15■■■□□ 2.74
TNFRSF25-213ENST00000480393 NOSTRINQ8IVI9 506 aa32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 LINC00301Q8NCQ3 95 aa32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 FOXP1Q9H334 677 aaPredicted RBP32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 DDX19AQ9NUU7 478 aaKnown RBP32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 PPP1R1BQ9UD71 204 aaPredicted RBP32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 hCG_1642624A0A1W2PR95 340 aa32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 CACNB3P54284 484 aa32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 RSBN1LQ6PCB5 846 aaPredicted RBP32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 IDI2Q9BXS1 227 aa32.14■■■□□ 2.74
TNFRSF25-213ENST00000480393 CFAP100Q494V2 611 aa32.13■■■□□ 2.73
TNFRSF25-213ENST00000480393 NIM1KQ8IY84 436 aa32.13■■■□□ 2.73
TNFRSF25-213ENST00000480393 CEP95Q96GE4 821 aa32.13■■■□□ 2.73
TNFRSF25-213ENST00000480393 NUP62CLQ9H1M0 184 aa32.13■■■□□ 2.73
TNFRSF25-213ENST00000480393 DHX36Q9H2U1 1008 aaKnown RBP32.13■■■□□ 2.73
TNFRSF25-213ENST00000480393 DACT1Q9NYF0 836 aa32.13■■■□□ 2.73
TNFRSF25-213ENST00000480393 VPS54Q9P1Q0 977 aa32.13■■■□□ 2.73
TNFRSF25-213ENST00000480393 BTBD18B2RXH4 712 aa32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 RAD17O75943 681 aa32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 TOP1P11387 765 aaKnown RBP32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 EHD4Q9H223 541 aa32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 MTMR7Q9Y216 660 aa32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 SPTLC2O15270 562 aa32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 TCP10Q12799 353 aa32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 CCAR1Q8IX12 1150 aaKnown RBP32.12■■■□□ 2.73
TNFRSF25-213ENST00000480393 CCDC73Q6ZRK6 1079 aa32.11■■■□□ 2.73
TNFRSF25-213ENST00000480393 KLHL34Q8N239 644 aa32.11■■■□□ 2.73
TNFRSF25-213ENST00000480393 BRMS1Q9HCU9 246 aa32.11■■■□□ 2.73
TNFRSF25-213ENST00000480393 PSMD14O00487 310 aa32.1■■■□□ 2.73
TNFRSF25-213ENST00000480393 AKR1B1P15121 316 aa32.1■■■□□ 2.73
TNFRSF25-213ENST00000480393 MAD2L2Q9UI95 211 aa32.1■■■□□ 2.73
TNFRSF25-213ENST00000480393 HDAC9Q9UKV0 1011 aa32.1■■■□□ 2.73
TNFRSF25-213ENST00000480393 MYH8P13535 1937 aa32.1■■■□□ 2.73
TNFRSF25-213ENST00000480393 NPM3O75607 178 aaKnown RBP32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 ZSCAN29Q8IWY8 852 aaPredicted RBP32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 FAM198AQ9UFP1 575 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 PCDHA7Q9UN72 937 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 COL4A5P29400 1685 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 VIL1P09327 827 aaKnown RBP32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 SCG2P13521 617 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 SHMT1P34896 483 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 KRT2P35908 639 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 ZFPM1Q8IX07 1006 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 STAG2Q8N3U4 1231 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 PIBF1Q8WXW3 757 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 LZTS2Q9BRK4 669 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 PHF20Q9BVI0 1012 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 TRIM34Q9BYJ4 488 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 RBSNQ9H1K0 784 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 TDRD3Q9H7E2 651 aaKnown RBP32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 ZNRF3Q9ULT6 936 aa32.09■■■□□ 2.73
TNFRSF25-213ENST00000480393 NR1I2O75469 434 aa32.08■■■□□ 2.73
TNFRSF25-213ENST00000480393 PANK2Q9BZ23 570 aa32.08■■■□□ 2.73
TNFRSF25-213ENST00000480393 PFKFB3Q16875 520 aaPredicted RBP32.07■■■□□ 2.72
TNFRSF25-213ENST00000480393 TNMDQ9H2S6 317 aa32.07■■■□□ 2.72
TNFRSF25-213ENST00000480393 CLSTN2Q9H4D0 955 aa32.07■■■□□ 2.72
TNFRSF25-213ENST00000480393 PARP1P09874 1014 aaKnown RBP32.06■■■□□ 2.72
TNFRSF25-213ENST00000480393 NOVP48745 357 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms