RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 BRAPQ7Z569 592 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 TAOK3Q9H2K8 898 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 COL4A5P29400 1685 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 KIF5BP33176 963 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 ZFPM1Q8IX07 1006 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 SYAP1Q96A49 352 aaPredicted RBP16.72■□□□□ 0.27
CLDN18-203ENST00000479660 USP28Q96RU2 1077 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 TMEM47Q9BQJ4 181 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 ECM29Q5VYK3 1845 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 GOLGA6L3A6NEY3 463 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 KIF28PB7ZC32 967 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
CLDN18-203ENST00000479660 PTGER2P43116 358 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 GNL2Q13823 731 aaKnown RBP16.71■□□□□ 0.27
CLDN18-203ENST00000479660 PRMT6Q96LA8 375 aaPredicted RBP16.71■□□□□ 0.27
CLDN18-203ENST00000479660 MAP3K14Q99558 947 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 DHX36Q9H2U1 1008 aaKnown RBP16.71■□□□□ 0.27
CLDN18-203ENST00000479660 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
CLDN18-203ENST00000479660 FAM198AQ9UFP1 575 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 BCS1LQ9Y276 419 aa16.71■□□□□ 0.27
CLDN18-203ENST00000479660 V9GY48 417 aaPredicted RBP16.71■□□□□ 0.27
CLDN18-203ENST00000479660 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
CLDN18-203ENST00000479660 OGFOD1Q8N543 542 aa16.7■□□□□ 0.26
CLDN18-203ENST00000479660 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
CLDN18-203ENST00000479660 CEP95Q96GE4 821 aa16.7■□□□□ 0.26
CLDN18-203ENST00000479660 GMLQ99445 158 aa16.7■□□□□ 0.26
CLDN18-203ENST00000479660 FTOQ9C0B1 505 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLDN18-203ENST00000479660 HDAC9Q9UKV0 1011 aa16.7■□□□□ 0.26
CLDN18-203ENST00000479660 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
CLDN18-203ENST00000479660 PSME4Q14997 1843 aa16.7■□□□□ 0.26
CLDN18-203ENST00000479660 MYSM1Q5VVJ2 828 aa16.7■□□□□ 0.26
CLDN18-203ENST00000479660 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
CLDN18-203ENST00000479660 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
CLDN18-203ENST00000479660 FSD2A1L4K1 749 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 ZNF445P59923 1031 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLDN18-203ENST00000479660 PKN1Q16512 942 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 EHD4Q9H223 541 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 MYH15Q9Y2K3 1946 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 CNTNAP5Q8WYK1 1306 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 hCG_1642624A0A1W2PR95 340 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
CLDN18-203ENST00000479660 MMP1P03956 469 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 AKR1B1P15121 316 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 XBP1P17861 261 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLDN18-203ENST00000479660 SHMT1P34896 483 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLDN18-203ENST00000479660 PI4KBQ9UBF8 816 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 MTMR7Q9Y216 660 aa16.69■□□□□ 0.26
CLDN18-203ENST00000479660 BRCA1P38398 1863 aaKnown RBP16.68■□□□□ 0.26
CLDN18-203ENST00000479660 NFKBIEO00221 500 aa16.68■□□□□ 0.26
CLDN18-203ENST00000479660 CXCL9Q07325 125 aa16.68■□□□□ 0.26
CLDN18-203ENST00000479660 GRM4Q14833 912 aa16.68■□□□□ 0.26
CLDN18-203ENST00000479660 GAS2L3Q86XJ1 694 aa16.68■□□□□ 0.26
CLDN18-203ENST00000479660 AGBL3Q8NEM8 1001 aa16.68■□□□□ 0.26
CLDN18-203ENST00000479660 PGBD1Q96JS3 809 aa16.68■□□□□ 0.26
CLDN18-203ENST00000479660 RTEL1Q9NZ71 1219 aa16.68■□□□□ 0.26
CLDN18-203ENST00000479660 ISY1Q9ULR0 285 aaKnown RBP16.68■□□□□ 0.26
CLDN18-203ENST00000479660 PLIN4Q96Q06 1357 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 TOP1P11387 765 aaKnown RBP16.67■□□□□ 0.26
CLDN18-203ENST00000479660 NOVP48745 357 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 GNAQP50148 359 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 DLGAP5Q15398 846 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 STAG2Q8N3U4 1231 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 MAD2L2Q9UI95 211 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 MYH6P13533 1939 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 FER1L6Q2WGJ9 1857 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 SYCE3A1L190 88 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 BTBD18B2RXH4 712 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 ENTPD3O75355 529 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 SH3BP5LQ7L8J4 393 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 DIS3L2Q8IYB7 885 aaKnown RBP16.67■□□□□ 0.26
CLDN18-203ENST00000479660 POLR3EQ9NVU0 708 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 VPS54Q9P1Q0 977 aa16.67■□□□□ 0.26
CLDN18-203ENST00000479660 BAZ2BQ9UIF8 2168 aaKnown RBP16.66■□□□□ 0.26
CLDN18-203ENST00000479660 UTRNP46939 3433 aa16.66■□□□□ 0.26
CLDN18-203ENST00000479660 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
CLDN18-203ENST00000479660 CCDC183Q5T5S1 534 aa16.66■□□□□ 0.26
CLDN18-203ENST00000479660 L1TD1Q5T7N2 865 aaKnown RBP16.66■□□□□ 0.26
CLDN18-203ENST00000479660 CIAPIN1Q6FI81 312 aa16.66■□□□□ 0.26
CLDN18-203ENST00000479660 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
CLDN18-203ENST00000479660 TRIM34Q9BYJ4 488 aa16.66■□□□□ 0.26
CLDN18-203ENST00000479660 DNAJC18Q9H819 358 aa16.66■□□□□ 0.26
CLDN18-203ENST00000479660 CLIC4Q9Y696 253 aa16.66■□□□□ 0.26
CLDN18-203ENST00000479660 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
CLDN18-203ENST00000479660 LINC00301Q8NCQ3 95 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 BICD2Q8TD16 824 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 PIBF1Q8WXW3 757 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 FOXP1Q9H334 677 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms