RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ARHGAP6O43182 974 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 TACC1O75410 805 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 KCNQ4P56696 695 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 CKAP4Q07065 602 aaKnown RBP16.1■□□□□ 0.17
COL20A1-206ENST00000479501 TDRD7Q8NHU6 1098 aaKnown RBP16.1■□□□□ 0.17
COL20A1-206ENST00000479501 ERO1AQ96HE7 468 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 DRC1Q96MC2 740 aa16.1■□□□□ 0.17
COL20A1-206ENST00000479501 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
COL20A1-206ENST00000479501 GOLGA6L10A0A0M3HER8 536 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 DIP2AQ14689 1571 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 LCORLQ8N3X6 602 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL20A1-206ENST00000479501 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 SH2B2O14492 632 aaPredicted RBP16.09■□□□□ 0.17
COL20A1-206ENST00000479501 SEMA3EO15041 775 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 PHACTR2O75167 634 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 SSR1P43307 286 aaKnown RBP16.09■□□□□ 0.17
COL20A1-206ENST00000479501 GTF2IP78347 998 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 MROH1Q8NDA8 1641 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 SCG2P13521 617 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 FOXO4P98177 505 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
COL20A1-206ENST00000479501 CSGALNACT2Q8N6G5 542 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 NAP1L4Q99733 375 aaKnown RBP16.09■□□□□ 0.17
COL20A1-206ENST00000479501 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
COL20A1-206ENST00000479501 STRBPQ96SI9 672 aaKnown RBP16.09■□□□□ 0.17
COL20A1-206ENST00000479501 BLIDQ8IZY5 108 aa16.08■□□□□ 0.17
COL20A1-206ENST00000479501 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.17
COL20A1-206ENST00000479501 IFNAR1P17181 557 aa16.08■□□□□ 0.16
COL20A1-206ENST00000479501 LIFRP42702 1097 aa16.08■□□□□ 0.16
COL20A1-206ENST00000479501 MAATS1Q7Z4T9 603 aa16.08■□□□□ 0.16
COL20A1-206ENST00000479501 RNF26Q9BY78 433 aaPredicted RBP16.08■□□□□ 0.16
COL20A1-206ENST00000479501 CYP2E1P05181 493 aaPredicted RBP16.08■□□□□ 0.16
COL20A1-206ENST00000479501 PPP4R3AQ6IN85 833 aa16.08■□□□□ 0.16
COL20A1-206ENST00000479501 CNNM4Q6P4Q7 775 aa16.08■□□□□ 0.16
COL20A1-206ENST00000479501 REXO1Q8N1G1 1221 aaKnown RBP16.08■□□□□ 0.16
COL20A1-206ENST00000479501 RASSF4Q9H2L5 321 aa16.08■□□□□ 0.16
COL20A1-206ENST00000479501 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.16
COL20A1-206ENST00000479501 SNAP23O00161 211 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 DDAH1O94760 285 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 DYNLL1P63167 89 aaKnown RBP16.07■□□□□ 0.16
COL20A1-206ENST00000479501 ARID5AQ03989 594 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 ZBTB9Q96C00 473 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 NOC4LQ9BVI4 516 aaKnown RBP16.07■□□□□ 0.16
COL20A1-206ENST00000479501 BLZF1Q9H2G9 400 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 VPS18Q9P253 973 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 TRAF5O00463 557 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 PPP6R2O75170 966 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 MICALL1Q8N3F8 863 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 FOXP1Q9H334 677 aaPredicted RBP16.07■□□□□ 0.16
COL20A1-206ENST00000479501 FMNL1O95466 1100 aaPredicted RBP16.07■□□□□ 0.16
COL20A1-206ENST00000479501 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 CETN2P41208 172 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 ADCY7P51828 1080 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 GABPB1Q06547 395 aaPredicted RBP16.07■□□□□ 0.16
COL20A1-206ENST00000479501 TRIM14Q14142 442 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
COL20A1-206ENST00000479501 ZNF827Q17R98 1081 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 SPECC1LQ69YQ0 1117 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 PXDNLA1KZ92 1463 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
COL20A1-206ENST00000479501 SLC1A4P43007 532 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 TSC1Q92574 1164 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 GLT8D2Q9H1C3 349 aa16.07■□□□□ 0.16
COL20A1-206ENST00000479501 EBAG9O00559 213 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 PUF60Q9UHX1 559 aaKnown RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 MAP2P11137 1827 aaKnown RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 CCDC172P0C7W6 258 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 KRT9P35527 623 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 SMC1AQ14683 1233 aaKnown RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 AIFM3Q96NN9 605 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 TAB2Q9NYJ8 693 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 CYP19A1P11511 503 aaPredicted RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 EZRP15311 586 aaKnown RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 TSGA10IPQ3SY00 556 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 WDR78Q5VTH9 848 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 HS2ST1Q7LGA3 356 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 TRIML1Q8N9V2 468 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 CDHR2Q9BYE9 1310 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 PRPF4BQ13523 1007 aaKnown RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 CCDC122Q5T0U0 273 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 ATG9AQ7Z3C6 839 aa16.06■□□□□ 0.16
COL20A1-206ENST00000479501 TTF2Q9UNY4 1162 aaKnown RBP16.06■□□□□ 0.16
COL20A1-206ENST00000479501 FAM13AO94988 1023 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 TUBB4BP68371 445 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 PTGDRQ13258 359 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 CABP7Q86V35 215 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 SNX29Q8TEQ0 813 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms