RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SPP2Q13103 211 aa18.04■□□□□ 0.48
COL16A1-211ENST00000479100 SNAPC2Q13487 334 aa18.04■□□□□ 0.48
COL16A1-211ENST00000479100 AFG3L2Q9Y4W6 797 aa18.04■□□□□ 0.48
COL16A1-211ENST00000479100 CCL15-CCL14A0A0B4J2E2 113 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 SOX10P56693 466 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 CCL15Q16663 113 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 FAM47AQ5JRC9 791 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 FBXO46Q6PJ61 603 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-211ENST00000479100 TMEM179Q6ZVK1 233 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 TBC1D10CQ8IV04 446 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 ZNF280CQ8ND82 737 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 MAP4K1Q92918 833 aa18.03■□□□□ 0.48
COL16A1-211ENST00000479100 LSG1Q9H089 658 aaKnown RBP18.03■□□□□ 0.48
COL16A1-211ENST00000479100 RBM8AQ9Y5S9 174 aaKnown RBP18.03■□□□□ 0.48
COL16A1-211ENST00000479100 CXCL11O14625 94 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 RANBP6O60518 1105 aaKnown RBP18.02■□□□□ 0.48
COL16A1-211ENST00000479100 CETPP11597 493 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 GUCY1A2P33402 732 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 TFAP4Q01664 338 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 ATP2B2Q01814 1243 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 CRHR2Q13324 411 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 AKNAD1Q5T1N1 836 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 GADL1Q6ZQY3 521 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 MFSD6Q6ZSS7 791 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 BRI3BPQ8WY22 251 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 FEZ1Q99689 392 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 NBPF3Q9H094 633 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.48
COL16A1-211ENST00000479100 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.02■□□□□ 0.48
COL16A1-211ENST00000479100 TACC3Q9Y6A5 838 aa18.02■□□□□ 0.48
COL16A1-211ENST00000479100 ATAD5Q96QE3 1844 aa18.02■□□□□ 0.47
COL16A1-211ENST00000479100 TSPY3P0CV98 308 aa18.01■□□□□ 0.47
COL16A1-211ENST00000479100 TSPY8P0CW00 308 aa18.01■□□□□ 0.47
COL16A1-211ENST00000479100 CLEC10AQ8IUN9 316 aa18.01■□□□□ 0.47
COL16A1-211ENST00000479100 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
COL16A1-211ENST00000479100 WDR18Q9BV38 432 aa18.01■□□□□ 0.47
COL16A1-211ENST00000479100 KCNH4Q9UQ05 1017 aa18.01■□□□□ 0.47
COL16A1-211ENST00000479100 MYH8P13535 1937 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 TSPY2A6NKD2 308 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 USP17L10C9JJH3 530 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 ORC4O43929 436 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 CAP1Q01518 475 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 ICA1Q05084 483 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 MTMR2Q13614 643 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 ZYXQ15942 572 aaKnown RBP18■□□□□ 0.47
COL16A1-211ENST00000479100 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 ACER1Q8TDN7 264 aa18■□□□□ 0.47
COL16A1-211ENST00000479100 BRCA2P51587 3418 aa17.99■□□□□ 0.47
COL16A1-211ENST00000479100 A0A0G2JLL6 359 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-211ENST00000479100 CYP21A2P08686 494 aa17.99■□□□□ 0.47
COL16A1-211ENST00000479100 HMGCS2P54868 508 aa17.99■□□□□ 0.47
COL16A1-211ENST00000479100 PRRT2Q7Z6L0 340 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-211ENST00000479100 KANSL2Q9H9L4 492 aa17.99■□□□□ 0.47
COL16A1-211ENST00000479100 ARHGEF10LQ9HCE6 1279 aa17.99■□□□□ 0.47
COL16A1-211ENST00000479100 CENPFP49454 3210 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 REC8O95072 547 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 FGRP09769 529 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 PCP11498 1178 aaKnown RBP17.98■□□□□ 0.47
COL16A1-211ENST00000479100 BACE1P56817 501 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 FASTKD5Q7L8L6 764 aaKnown RBP17.98■□□□□ 0.47
COL16A1-211ENST00000479100 OTOP1Q7RTM1 612 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 NEDD1Q8NHV4 660 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL16A1-211ENST00000479100 TMOD4Q9NZQ9 345 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 NEDD4P46934 1319 aa17.98■□□□□ 0.47
COL16A1-211ENST00000479100 BTBD19C9JJ37 291 aa17.97■□□□□ 0.47
COL16A1-211ENST00000479100 RAD21O60216 631 aa17.97■□□□□ 0.47
COL16A1-211ENST00000479100 EEF2P13639 858 aaKnown RBP17.97■□□□□ 0.47
COL16A1-211ENST00000479100 CREB3L3Q68CJ9 461 aa17.97■□□□□ 0.47
COL16A1-211ENST00000479100 FAM43AQ8N2R8 423 aa17.97■□□□□ 0.47
COL16A1-211ENST00000479100 ESR2Q92731 530 aa17.97■□□□□ 0.47
COL16A1-211ENST00000479100 TRIM17Q9Y577 477 aa17.97■□□□□ 0.47
COL16A1-211ENST00000479100 PHIPQ8WWQ0 1821 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 A0A1W2PRG0 241 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 B4E1Z4 1266 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 SLC27A2O14975 620 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 KDM4AO75164 1064 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 TRDNQ13061 729 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 USP17L2Q6R6M4 530 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 CEP95Q96GE4 821 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 KRT23Q9C075 422 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 CNNM2Q9H8M5 875 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 TAF6LQ9Y6J9 622 aa17.96■□□□□ 0.47
COL16A1-211ENST00000479100 MKI67P46013 3256 aaKnown RBP17.96■□□□□ 0.47
COL16A1-211ENST00000479100 IGKV6D-41A0A0C4DH26 115 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 E7EWF7 191 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 NMT2O60551 498 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 USP14P54578 494 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 SP3Q02447 781 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 MOGSQ13724 837 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
COL16A1-211ENST00000479100 SIAH1Q8IUQ4 282 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 CD99L2Q8TCZ2 262 aa17.95■□□□□ 0.46
COL16A1-211ENST00000479100 ERO1AQ96HE7 468 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms