RNA–Protein interactions for RNA: ENST00000478768.2

SNAP47-208, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 3

Gene SNAP47, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-208ENST00000478768 PRDM5Q9NQX1 630 aaPredicted RBP12.35□□□□□ -0.43
SNAP47-208ENST00000478768 IVNS1ABPQ9Y6Y0 642 aa12.35□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L15C9J2P7 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L13C9JLJ4 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L11C9JVI0 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L18D6R9N7 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L22D6RA61 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L17D6RBQ6 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L19D6RCP7 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L20D6RJB6 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 HOXC6P09630 235 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 CYBAP13498 195 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
SNAP47-208ENST00000478768 USP17L24Q0WX57 530 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 GRB14Q14449 540 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 GJC2Q5T442 439 aaPredicted RBP12.34□□□□□ -0.43
SNAP47-208ENST00000478768 SLC39A5Q6ZMH5 540 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 TRPV1Q8NER1 839 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 NPLOC4Q8TAT6 608 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 BADQ92934 168 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 C12orf42Q96LP6 360 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 FEZ1Q99689 392 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 SAP30BPQ9UHR5 308 aaKnown RBP12.34□□□□□ -0.43
SNAP47-208ENST00000478768 NOB1Q9ULX3 412 aaKnown RBP12.34□□□□□ -0.43
SNAP47-208ENST00000478768 ZNF236Q9UL36 1845 aa12.34□□□□□ -0.43
SNAP47-208ENST00000478768 KBTBD13C9JR72 458 aa12.33□□□□□ -0.44
SNAP47-208ENST00000478768 GH2P01242 217 aa12.33□□□□□ -0.44
SNAP47-208ENST00000478768 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
SNAP47-208ENST00000478768 FOSL2P15408 326 aa12.33□□□□□ -0.44
SNAP47-208ENST00000478768 PPP4CP60510 307 aa12.33□□□□□ -0.44
SNAP47-208ENST00000478768 ARRDC4Q8NCT1 418 aa12.33□□□□□ -0.44
SNAP47-208ENST00000478768 SYMPKQ92797 1274 aaKnown RBP12.33□□□□□ -0.44
SNAP47-208ENST00000478768 BTBD7Q9P203 1132 aa12.33□□□□□ -0.44
SNAP47-208ENST00000478768 MUC3AQ02505 3323 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 IGHA2P01877 340 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 UQCRFS1P1P0C7P4 283 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 VCAM1P19320 739 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 SLFN5Q08AF3 891 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 MTX1Q13505 466 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 SNX17Q15036 470 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 TRIM60Q495X7 471 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 ANO1Q5XXA6 986 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 LBX2Q6XYB7 198 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 CATSPERGQ6ZRH7 1159 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 API5Q9BZZ5 524 aaKnown RBP12.32□□□□□ -0.44
SNAP47-208ENST00000478768 PDLIM7Q9NR12 457 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
SNAP47-208ENST00000478768 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
SNAP47-208ENST00000478768 USP14P54578 494 aa12.31□□□□□ -0.44
SNAP47-208ENST00000478768 SH3RF1Q7Z6J0 888 aa12.31□□□□□ -0.44
SNAP47-208ENST00000478768 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
SNAP47-208ENST00000478768 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
SNAP47-208ENST00000478768 GNAI3P08754 354 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 ADORA2AP29274 412 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 ADCYAP1R1P41586 468 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 RAB3GAP1Q15042 981 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 TTC39AQ5SRH9 613 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 OLFML2BQ68BL8 750 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 TRIM43Q96BQ3 446 aaPredicted RBP12.3□□□□□ -0.44
SNAP47-208ENST00000478768 A0A0G2JMZ2 1700 aa12.3□□□□□ -0.44
SNAP47-208ENST00000478768 SEPT4O43236 478 aa12.29□□□□□ -0.44
SNAP47-208ENST00000478768 CYP2E1P05181 493 aaPredicted RBP12.29□□□□□ -0.44
SNAP47-208ENST00000478768 COL9A1P20849 921 aa12.29□□□□□ -0.44
SNAP47-208ENST00000478768 DYNLL1P63167 89 aaKnown RBP12.29□□□□□ -0.44
SNAP47-208ENST00000478768 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
SNAP47-208ENST00000478768 ACER1Q8TDN7 264 aa12.29□□□□□ -0.44
SNAP47-208ENST00000478768 FERMT2Q96AC1 680 aa12.29□□□□□ -0.44
SNAP47-208ENST00000478768 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
SNAP47-208ENST00000478768 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
SNAP47-208ENST00000478768 RPAP3Q9H6T3 665 aaPredicted RBP12.29□□□□□ -0.44
SNAP47-208ENST00000478768 SMCHD1A6NHR9 2005 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 ITGB8P26012 769 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 G3BP1Q13283 466 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNAP47-208ENST00000478768 LRRC41Q15345 812 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 CCDC158Q5M9N0 1113 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 USP38Q8NB14 1042 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 MOV10L1Q9BXT6 1211 aaKnown RBP12.28□□□□□ -0.44
SNAP47-208ENST00000478768 EHD4Q9H223 541 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
SNAP47-208ENST00000478768 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
SNAP47-208ENST00000478768 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 STRNO43815 780 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 COBLO75128 1261 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 CYP7A1P22680 504 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 EPHB4P54760 987 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 TLE2Q04725 743 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 GRIN2CQ14957 1233 aa12.27□□□□□ -0.45
SNAP47-208ENST00000478768 CERKLQ49MI3 558 aaPredicted RBP12.27□□□□□ -0.45
SNAP47-208ENST00000478768 PRAMEF19Q5SWL8 479 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms