RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 ZNF213O14771 459 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 PRDM1O75626 825 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 CYP21A2P08686 494 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 MAP3K11Q16584 847 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 TATDN1Q6P1N9 297 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 ARMC9Q7Z3E5 817 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 C2orf69Q8N8R5 385 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.61□□□□□ -0.23
CBWD3-206ENST00000478048 ZKSCAN4Q969J2 545 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-206ENST00000478048 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-206ENST00000478048 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 ZNF112Q9UJU3 913 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 ANAPC4Q9UJX5 808 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 MYH8P13535 1937 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 TMEM88BA6NKF7 163 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 REC8O95072 547 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 GDF11O95390 407 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 PSEN2P49810 448 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 JAG1P78504 1218 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 NECTIN1Q15223 517 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
CBWD3-206ENST00000478048 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-206ENST00000478048 NKX2-3Q8TAU0 364 aa13.61□□□□□ -0.23
CBWD3-206ENST00000478048 IREB2P48200 963 aaKnown RBP13.6□□□□□ -0.23
CBWD3-206ENST00000478048 APLP1P51693 650 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 FKBP1BP68106 108 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 DMRTA1Q5VZB9 504 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 SAPCD2Q86UD0 394 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 CLMNQ96JQ2 1002 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 USP26Q9BXU7 913 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-206ENST00000478048 SWAP70Q9UH65 585 aa13.6□□□□□ -0.23
CBWD3-206ENST00000478048 HUNKP57058 714 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 HTRA3P83110 453 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 VGLL4Q14135 290 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-206ENST00000478048 LDLRAD1Q5T700 205 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 CREB3L3Q68CJ9 461 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
CBWD3-206ENST00000478048 TLL2Q9Y6L7 1015 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 ATAD5Q96QE3 1844 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 SLC27A2O14975 620 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 AKR1B1P15121 316 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 RASA1P20936 1047 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 CAP2P40123 477 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 STAG1Q8WVM7 1258 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
CBWD3-206ENST00000478048 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
CBWD3-206ENST00000478048 HRO43593 1189 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 CTNND1O60716 968 aaKnown RBP13.58□□□□□ -0.24
CBWD3-206ENST00000478048 SLC3A2P08195 630 aaKnown RBP13.58□□□□□ -0.24
CBWD3-206ENST00000478048 FGRP09769 529 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 PDE4BQ07343 736 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 STOX1Q6ZVD7 989 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 CCDC84Q86UT8 332 aaPredicted RBP13.58□□□□□ -0.24
CBWD3-206ENST00000478048 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 SNCAIPQ9Y6H5 919 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 NEDD4P46934 1319 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 DOCK1Q14185 1865 aa13.58□□□□□ -0.24
CBWD3-206ENST00000478048 GH2P01242 217 aa13.57□□□□□ -0.24
CBWD3-206ENST00000478048 HSPA4P34932 840 aa13.57□□□□□ -0.24
CBWD3-206ENST00000478048 COL9A3Q14050 684 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-206ENST00000478048 FAM47AQ5JRC9 791 aa13.57□□□□□ -0.24
CBWD3-206ENST00000478048 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
CBWD3-206ENST00000478048 MFSD6Q6ZSS7 791 aa13.57□□□□□ -0.24
CBWD3-206ENST00000478048 SCYL3Q8IZE3 742 aa13.57□□□□□ -0.24
CBWD3-206ENST00000478048 TOMM22Q9NS69 142 aa13.57□□□□□ -0.24
CBWD3-206ENST00000478048 CSADQ9Y600 493 aa13.57□□□□□ -0.24
CBWD3-206ENST00000478048 E7EWF7 191 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
CBWD3-206ENST00000478048 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-206ENST00000478048 ORC4O43929 436 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 GUCY1A2P33402 732 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 NOL9Q5SY16 702 aaKnown RBP13.56□□□□□ -0.24
CBWD3-206ENST00000478048 ZNF444Q8N0Y2 327 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-206ENST00000478048 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
CBWD3-206ENST00000478048 RANBP6O60518 1105 aaKnown RBP13.56□□□□□ -0.24
CBWD3-206ENST00000478048 PTPRAP18433 802 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
CBWD3-206ENST00000478048 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
CBWD3-206ENST00000478048 PHIPQ8WWQ0 1821 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 B4E1Z4 1266 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 HSPA6P17066 643 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 GJA5P36382 358 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 TFAP4Q01664 338 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 SEPT2Q15019 361 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 ADCK5Q3MIX3 580 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms